Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq88634 309 9e-82 seq3144 223 1e-55 >seq88634 Length=2106 Score = 309 bits (342), Expect = 9e-82 Identities = 246/296 (83%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 201 GTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTC 260 |||||||||||||||||||||||||||| |||||||| | |||| ||||| ||||| Sbjct 2106 GTTAAGTCCCGCAACGAGCGCAACCCTTGCCATTAGTTGCTAGCATTTAGTTGAGCACTT 2047 Query 261 TAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCC 320 ||| ||||||||||||||||||||||||||||||||| |||||||| || ||||| || Sbjct 2046 TAATGGGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCC 1987 Query 321 CTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGA 380 ||||||| ||||| ||||||| |||||||| | |||| |||| || || |||||| Sbjct 1986 CTTATGACCAGGGCTTCACACGTCATACAATGGTCGGTACAGAGGGTTGCTAAGCCGCGA 1927 Query 381 GGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATA 440 ||| ||| ||||||| |||| | || ||| ||||||| |||||||||||||||| | Sbjct 1926 GGTGGAGCCAATCCCAGAAAGCCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCA 1867 Query 441 TGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 ||||| ||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 1866 TGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGTCGCGGTGAATACGTTCCCG 1811 >seq3144 Length=207 Score = 223 bits (246), Expect = 1e-55 Identities = 173/206 (84%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 271 GCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTT 330 |||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| | Sbjct 207 GCCGGTGACAAACCGGAGGAAGGTGGGGACGATGTCAAGTCATCATGGCCCTTATACCCT 148 Query 331 GGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAA 390 ||||||||||||||||||||||| | ||||||| | |||||| | | ||||| ||| | Sbjct 147 GGGCTACACACGTGCTACAATGGCCGGTACAAAGTGAAGCGAAGCTGTGAGGTGGAGCCA 88 Query 391 ATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGA 450 | | || |||| | ||||||||||||||| |||||| ||||||||| |||||| |||| Sbjct 87 AACGCAAAAAGCCGGTCTCAGTTCGGATTGAAGTCTGAAACTCGACTTCATGAAGGTGGA 28 Query 451 ATCGCTAGTAATCGTAGATCAGCATG 476 |||||||||||||| ||||| ||| Sbjct 27 ATCGCTAGTAATCGCGCATCAGAATG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1502472763200