Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq52003 116 7e-24 >seq52003 Length=576 Score = 116 bits (128), Expect = 7e-24 Identities = 136/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||| |||| | ||||||||||||||||||||| |||||||||| |||||||||| Sbjct 393 GGGACCGTGTATGGTAGGCAGTTTGACTGGGGCGGTCTCCTCCCAAAGTGTAACGGAGGA 452 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 || | ||| | ||| | || ||| | | | | | |||| || |||| |||| | Sbjct 453 GCTCGAAGGTCACCTAGGTACGGTCGGACATCGTACTGATAGTGTAATGGCACAAGGTGG 512 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 |||||||||| || |||||| |||||| |||||| || | || |||||||| ||| Sbjct 513 CTTGACTGCGAGACGGACAAGTCGAGCAGGTGCGAAAGCAGGACATAGTGATCCGGTGGT 572 Query 291 GCTG 294 ||| Sbjct 573 TCTG 576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981402421920