Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq47355 325 8e-87 seq44859 143 6e-32 >seq47355 Length=988 Score = 325 bits (360), Expect = 8e-87 Identities = 279/339 (82%), Gaps = 7/339 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| ||| ||||||| |||| ||||||||| ||| || || Sbjct 224 CTTTACAACCCGAAGGCCTTCTT-CACCCACGCGGAATTG-CTGGATCAGACTTGCGTCC 281 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 282 ATTGTCCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 341 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | | || |||||||||||| | ||| ||||||||||||||||||| |||||||| Sbjct 342 TGTGGCGGGTCGTCCTCTCAGACCCGCTACTGATCGTCGCCTTGGTGAGCATTTACCTCA 401 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| ||| | ||| ||| |||||| ||||| ||||||| ||| Sbjct 402 CCAACTAGCTAATCAGACATCGGCCGCTCTAATAGCGTGAGGCCTTGCGGTCCCCCACTT 461 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCG--TTTCCGAACGTTATCCCCCACTAC- 297 || ||| ||| | |||||||||||| |||| |||| | ||||||||||||| Sbjct 462 TCACCCTCAGGTCTTATGCGGTATTA--ATCCGGCTTTCGCCGGGCTATCCCCCACTACA 519 Query 298 CAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||||| |||| | | |||||||||||||||||| ||| Sbjct 520 TAGGCACGTTCCGATGTATTACTCACCCGTCCGCCACTC 558 >seq44859 Length=430 Score = 143 bits (158), Expect = 6e-32 Identities = 92/98 (94%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||| | |||||||||||||| ||||||||||||||||||||| Sbjct 96 CTTTACAACCCTAAGGCCTTCAT-CACACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 39 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 98 |||||||||||||||||||||||||||||||||||||| Sbjct 38 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070911437600