Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq88634 365 2e-98 seq22670 156 2e-35 >seq88634 Length=2106 Score = 365 bits (404), Expect = 2e-98 Identities = 426/562 (76%), Gaps = 20/562 (4%) Strand=Plus/Plus Query 40 GCTCTCACTTCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAG-CTTGTGGGCCCCCTA 97 |||| ||||| ||| |||| ||||||| || ||| |||||| | | | ||||||| Sbjct 167 GCTCACACTTAACGGTATTCAGAGTTTGCCATGGTTT-GGTAAGTCGCGATGACCCCCTA 225 Query 98 GACCATC-CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTC 156 | |||| ||||||| |||| ||| | | | || || || |||||||| |||| Sbjct 226 G-CCATAACAGTGCTTTACCCCCGTTA-GTGATACTTGAGGCACTACCTAAATAGTTTTC 283 Query 157 GGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCC 216 |||||||||||||||| | ||||||| || ||||||||||||||||||||| ||||||| Sbjct 284 GGGGAGAACCAGCTATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCC 343 Query 217 CTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTG 276 || | ||| |||| | |||||||||||||||||| ||| |||||| ||||| |||| Sbjct 344 CTAATTTTGCAACATTAGTGGGTTCGGTCCTCCAGTGGGTGTTACCCCACCTTCATCCTG 403 Query 277 CCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGA 336 ||||||||||||||||| | ||||||||| | || ||||| |||||||||||||| Sbjct 404 GCCATGGATAGATCACTTGGTTTCGGGTCTACGCCCAGCAACTCA-ACGCCCTATTCGGA 462 Query 337 CTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAG 396 |||| |||| ||||| || ||| | | |||||| ||||| || |||| || |||| | Sbjct 463 CTCGGTTTCCCTACGCCTCCCCTATTC-GGTTAAGCTCGCTACTGAACG-TAAGTCGCTG 520 Query 397 GCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGG 456 | |||| | ||||||| |||| ||||| || | ||| || ||||| || | Sbjct 521 ACCCATTATACAAAAGGTACGCAGTCAC--GGATC----AAG-----TCCGCTCCCACTG 569 Query 457 ATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTT 516 ||||| ||| ||||||||| |||||||||||||| | ||||| |||||| ||||| Sbjct 570 TTTGTATGCATCCGGTTTCAGGATCTATTTCACTCCCCTTCCGGGGTTCTTTTCGCCTTT 629 Query 517 CCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 ||||||||||||| || | ||||||||| | |||||||||| ||| || |||||| Sbjct 630 CCCTCACGGTACTGGTTCACTATCGGTCGATGATGAGTATTTAGCCTTGGAGGATGGTCC 689 Query 577 CGCCAGATTCACACGAAATTTC 598 | ||| |||| || ||||| Sbjct 690 CCCCATCTTCAAACAGGATTTC 711 >seq22670 Length=334 Score = 156 bits (172), Expect = 2e-35 Identities = 223/307 (73%), Gaps = 8/307 (3%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| | | | |||| || ||| ||||||||| || || | ||| |||||||| Sbjct 32 TCGACCATGAACCTTA-TCGCCCACAGTCTCACTCCCATAGTCCCT-TTCACGGCATTCC 89 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGG-GCCCCCTAGACCATCCAGTGCTCTACCTCC 119 ||||| | | || |||| | ||| ||||||||| | | || ||| ||||||| Sbjct 90 CAGTTTAACTAAGTTTGGTAGACG-GTGAAGCCCCCTAGCCTAATTAGCGCTTTACCTCC 148 Query 120 GGGAAGAAACACGC---GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACG 176 | ||| | || | | || |||| | |||| ||||||| |||| |||||||||| | Sbjct 149 GTGAA-ATACTCTCTATGAGGCTGATCTTAAAACCATTTCGAGGAGTACCAGCTATCTCC 207 Query 177 AAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTG 236 |||||||| |||||||||||||| ||||| |||||||| | || | ||| | | Sbjct 208 GGGTTTGATTAGCCTTTCACCCCTACCCACAAGTCATCCCTGCCTTTGTTAACAGACTAG 267 Query 237 GGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCG 296 ||||||||||||||| || |||||| |||||||||||| ||| | |||||||| | Sbjct 268 GGTTCGGTCCTCCACTTGGCTTTACCCAAGCTTCAACCTGCTCATAGGTAGATCACCCGG 327 Query 297 CTTCGGG 303 ||||||| Sbjct 328 CTTCGGG 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1815754318080