Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq88634 430 3e-118 >seq88634 Length=2106 Score = 430 bits (476), Expect = 3e-118 Identities = 353/415 (85%), Gaps = 11/415 (3%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| || |||| |||| |||| |||| |||||||||||||||| | Sbjct 325 CCTATCCACAGCTCATCCC-CTAA-TTTTGCAACATTAGTGGGTTCGGTCCTCCAGTGGG 382 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||||| ||||| || |||| |||| ||||||||| | ||||| |||||||| | Sbjct 383 T-GTTACCCCACCTT-CATCCTGGCCAT-GGATAGATCACTTGGTTT-CGGGTCTACG-C 437 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||| ||| |||||||| | |||||| ||| | |||||||||||||||||||||||| Sbjct 438 CCAGCAACTCAACGCCCTATTCGGACTCGGTTTCC-CTACGCCTCCCCTATTCGGTTAAG 496 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 || || |||||| |||||||||||||||||||||||||||||||||||||| | ||| Sbjct 497 CTC-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACGGATCAA 555 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 || |||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 556 -GTCCGCTCCCACTGTTTGTATGCATCCGGTTTCAGGATCTATTTCACTCCCCT-TCCGG 613 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||| Sbjct 614 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATGATGAGTATTTAG 673 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||||||||||||||| |||| ||| ||||||||| ||| |||||| Sbjct 674 CCTTGGAGGATGGTCCCCCCATCTTCAAACAGGATTTCTCGTGTCCCGCCCTACT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240339217280