Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq44859 237 3e-60 seq27309 163 5e-38 seq47355 120 5e-25 >seq44859 Length=430 Score = 237 bits (262), Expect = 3e-60 Identities = 224/283 (79%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | | |||| | ||||||||||||||||||| Sbjct 413 CCCACGCTTTCGCACCTCAGCGTCAGTACCGGACCAGTGAGCCGCCTTCGCCACTGGTGT 354 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || | || ||||||||| |||||||| |||||| ||||||||| | ||||||| | | Sbjct 353 TCTTGCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTCCTGGAT 294 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG-GTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| | |||| | ||| ||| | ||| ||||||| | | |||||| ||| || Sbjct 293 TCAAGCGATGCAGTCTTAAAGGCAAT-TCTGGAGTTGAGCTCCAGGCTTTCACCTCTAAC 235 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || | |||||||| || |||||| |||| ||| |||| | |||||| ||| ||| | Sbjct 234 TTACAAAGCCGCCTACGTGCGCTTTACGCCCAGTAATTCCGAACAACGCTAGCCCCCTTC 175 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 174 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTC 132 >seq27309 Length=405 Score = 163 bits (180), Expect = 5e-38 Identities = 208/285 (73%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| ||||||| ||||||||||| ||| || | || || ||||||||||| | ||| | Sbjct 26 CCCATACTTTCGCACCTCAGCGTCAATTATTGCCTAGAAACCCGCCTTCGCCTCCGGTAT 85 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||| || ||| |||| |||||| | ||||| || || || || | Sbjct 86 TCCTTCTGATATCAACAGATTCCACCCCTACACCAGAAATTCTAGTTTCCCCTGCAAAAT 145 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG---GTTGAGCCCATAGTTTTCACATCTG 177 || || | | |||||| | || || | ||| ||| ||| ||| | | Sbjct 146 TCTAGTCATATAGTTTCCAGCGC---CTCTCCACAGTTAAGCTGTGGCCTTTAACACCAG 202 Query 178 ACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237 |||| | ||||||||| ||||||||| |||||||| |||| | |||||| || | | Sbjct 203 ACTTATATGTCCGCCTACATGCCCTTTACGCCCAATAATTCCGAACAACGCTCGCTCCTT 262 Query 238 ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 263 ACGTATTACCGCGGCTGCTGGCACGTAATTAGCCGGAGCTTATTC 307 >seq47355 Length=988 Score = 120 bits (132), Expect = 5e-25 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 152 GGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCA 211 |||||||||| | |||||| ||| ||| | || ||| | | | |||||| |||| Sbjct 33 GGTTGAGCCCGGGGATTTCACGACTGTCTTAACAAACCACCTGCGCACGCTTTACGCCCA 92 Query 212 ATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCC 271 ||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 93 GTAATTCCGATTAACGCTTGCACCCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCC 152 Query 272 GTGGCTTATTCCTCAGGTA 290 | ||| |||| || |||| Sbjct 153 GGTGCTGATTCTTCCGGTA 171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827984695195