Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq47355 316 5e-84 seq44859 147 5e-33 >seq47355 Length=988 Score = 316 bits (350), Expect = 5e-84 Identities = 322/413 (78%), Gaps = 9/413 (2%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||||||||||||||||| ||||||| || |||| ||||| |||||| |||| Sbjct 224 CTTTACAACCCGAAGGCCTTCTTCACCCACGCGGAATTGCTGGATCAGACTTGCGTCCAT 283 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 284 TGTCCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 343 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||| |||| |||||||||||| |||| ||||||||||| |||| || ||||| | || Sbjct 344 TGGCGGGTCGTCCTCTCAGACCCGCTACTGATCGTCGCCTTGGTGAGCATTTACCTCACC 403 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 |||||||||||| | | || || |||| | |||||| |||||||| |||| Sbjct 404 AACTAGCTAATCAGACATCGGCCGCTCTAATAGCGTGAGGCCTTGCGGTCCCCCACTTTC 463 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCC--CTCCATCAG 301 | | | ||||||||||||| | |||| || ||||||| || ||| || Sbjct 464 ACCCTCAGGTCTTATGCGGTATTAATCCGGCTTTCGCCGGGCTATCCCCCACTACAT-AG 522 Query 302 GCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTC 361 ||| |||| | |||||||||||||||||||||| | || |||||| | | Sbjct 523 GCACGTTCCGATGTATTACTCACCCGTCCGCCACTC--ACTTGTAG-GGCAAGC-CCCAC 578 Query 362 CTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 || ||||||||||||||||||| | || | |||||||||||||||||||| Sbjct 579 AAGT--CCGTTCGACTTGCATGTGTAAAGCATTCCGCCAGCGTTCAATCTGAG 629 >seq44859 Length=430 Score = 147 bits (162), Expect = 5e-33 Identities = 92/99 (93%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || ||||||||||| ||||||||| ||| |||||||||||||||| ||||||||| |||| Sbjct 99 GTGCTTTACAACCCTAAGGCCTTCATCACACACGCGGCATGGCTGGATCAGGCTTTCGCC 40 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 99 |||||| |||||||||||||||||||||||||||||||| Sbjct 39 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221158713920