Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq47355 324 4e-86 seq44859 271 2e-70 seq27309 104 7e-20 >seq47355 Length=988 Score = 324 bits (358), Expect = 4e-86 Identities = 287/361 (80%), Gaps = 26/361 (7%) Strand=Plus/Minus Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222 ||||||||||||||||||| |||||| ||| ||||||||||||||||||||| | ||| Sbjct 419 GTCTGATTAGCTAGTTGGTGAGGTAAATGCTCACCAAGGCGACGATCAGTAGCGGGTCTG 360 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| || | |||||| ||| |||||||||||| ||| |||||||||||||||||||| Sbjct 359 AGAGGACGACCCGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAG 300 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||| ||| ||||||| | ||| ||||| |||||| ||||||| | || ||||| Sbjct 299 TGGGGAATCTTGGACAATGGACGCAAGTCTGATCCAGCAATTCCGCGTGGGTGAAGAAGG 240 Query 343 CCTTCGGGTCGTAAAGC---TCTGTCCTCAAGGAA------------GATA--------- 378 ||||||||| ||||||| | ||||| ||||| ||| Sbjct 239 CCTTCGGGTTGTAAAGCCCTTTTGTCCGGGAGGAAATCCTAGCTTTTAATAGAGGTTGGG 180 Query 379 -ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437 ||||| |||| || || ||| ||||||||||||||||||||||||||||||||||| Sbjct 179 GATGACAGTACCGGAAGAATCAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 120 Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497 ||||| || ||||||| |||||||||| |||||||||| ||||| ||||||||| |||| Sbjct 119 TAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGTGGTTTGTTAA 61 Query 498 G 498 | Sbjct 60 G 60 >seq44859 Length=430 Score = 271 bits (300), Expect = 2e-70 Identities = 203/237 (86%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| | Sbjct 1 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCA 60 Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGA 382 |||||||| | |||||||||||| |||| ||||||| || || |||||||||||| Sbjct 61 TGCCGCGTGTGTGATGAAGGCCTTAGGGTTGTAAAGCACTTTCACTGGGGAAGATAATGA 120 Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442 |||||| || |||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 121 CGGTACCCAGAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGG 180 Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||||||||| | |||||||||| |||||||||| | |||||| || || ||||| Sbjct 181 GGCTAGCGTTGTTCGGAATTACT-GGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGT 236 >seq27309 Length=405 Score = 104 bits (114), Expect = 7e-20 Identities = 79/92 (86%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| |||||||| |||||||||||||||||||||||||||| || || |||||| | || Sbjct 303 AAGCTCCGGCTAATTACGTGCCAGCAGCCGCGGTAATACGTAAGGAGCGAGCGTTGTTCG 244 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 |||||| | |||||||||||| ||||| || Sbjct 243 GAATTA-TTGGGCGTAAAGGGCATGTAGGCGG 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496079262080