Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq44859 327 3e-87 seq27309 226 7e-57 seq47355 168 2e-39 >seq44859 Length=430 Score = 327 bits (362), Expect = 3e-87 Identities = 252/299 (84%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 132 GAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTG 191 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||||||||||||||| | |||||| || || ||||| ||||||||||| || Sbjct 192 TTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGTTAGAGGTGAAAGCCT 251 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 ||||||| || | | ||| ||| | |||||| ||| || | |||||| || |||| Sbjct 252 GGAGCTCAACTCCAGAATTGCCTTTAAGACTGCATCGCTTGAATCCAGGAGAGGTGAGTG 311 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||||| ||||||| |||||||| |||||||||| | | |||||||||||||||||||| Sbjct 312 GAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGCAAGAACACCAGTGGCGAAGGCG 371 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 ||| |||| | | |||||| |||||| ||||||||||||||||||||||||||||| Sbjct 372 GCTCACTGGTCCGGTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 430 >seq27309 Length=405 Score = 226 bits (250), Expect = 7e-57 Identities = 232/303 (77%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||| |||||||||||||||||||||||||||| || || |||||| | || Sbjct 303 AAGCTCCGGCTAATTACGTGCCAGCAGCCGCGGTAATACGTAAGGAGCGAGCGTTGTTCG 244 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||| ||||||||||||| ||||| || |||||| | || |||||| | | Sbjct 243 GAATTATTGGGCGTAAAGGGCATGTAGGCGGACATATAAGTCTGGTGTTAAAGGCCACAG 184 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 || ||| || || | |||||| | | ||||| | | ||||| || | |||| Sbjct 183 CTTAACTGTGGAGAGGCGCTGGAAACTATATGACTAGAATTTTGCAGGGGAAACTAGAAT 124 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | || |||||| |||| ||| || ||||| || ||||| ||| | ||||||||||| || Sbjct 123 TTCTGGTGTAGGGGTGGAATCTGTTGATATCAGAAGGAATACCGGAGGCGAAGGCGGGTT 64 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 || | | ||| |||| |||||| |||||| |||||||||||||||||||||||||| Sbjct 63 TCTAGGCAATAATTGACGCTGAGGTGCGAAAGTATGGGGAGCAAACAGGATTAGATACCC 4 Query 313 TGG 315 ||| Sbjct 3 TGG 1 >seq47355 Length=988 Score = 168 bits (186), Expect = 2e-39 Identities = 132/158 (84%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 14 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 73 ||| |||||||||||||||||||||||||||||||||||||||| || ||||||| ||| Sbjct 158 AGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGG 99 Query 74 AATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGC 133 ||||||||||||||||| ||||| ||||||||| ||||| ||| |||||| | ||| Sbjct 98 AATTACTGGGCGTAAAGCGTGCGCAGGTGGTTTGTTAAGACAGTCGTGAAATCCCCGGGC 39 Query 134 TCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG 171 |||||| || ||||| ||| |||| |||||||| Sbjct 38 TCAACCTGGGCACTGCGATTGTGACTGGCAGGCTAGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201978210560