Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq97562 381 2e-103 seq81101 340 6e-91 seq43703 327 4e-87 seq37061 158 4e-36 seq37060 158 4e-36 seq67150 136 1e-29 >seq97562 Length=950 Score = 381 bits (422), Expect = 2e-103 Identities = 359/460 (78%), Gaps = 38/460 (8%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| ||||||||||||||||||| Sbjct 494 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTAGCCTTAGGACACCTGCGTTACC 553 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||| |||| || ||||| Sbjct 554 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTCCTCGGAGGGGATC 613 Query 127 GGCCCGCGAAGGACCTT--------------AACGCCA-GAAAA---------------- 155 | |||| | ||| | ||| || ||| | Sbjct 614 GTGCCGCAGTGCACCATTCACGAGGAATAGCAACACCTCGAACACTTTAGTCAAGAAGCG 673 Query 156 TGGTCGGTGAAGACCAG--TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTG 213 ||| | || || | | | |||| ||| | || | |||||| |||| || | |||||| Sbjct 674 TGGACTGTTAAAATCCGCTTTCCACTTAACCGAGTCAGTAAAGAAACTATGAAAGTAGTG 733 Query 214 GTATTTCACTTGCGCCGAAACGG--CTCCCACTTATTCTACACCTCTCAAGTCATTTCAC 271 ||||||||| || |||| | ||||||||||| |||||||||||| ||| ||||| Sbjct 734 GTATTTCAC---CGGCGAATTGCTTCTCCCACTTATGCTACACCTCTCATGTCTCTTCAC 790 Query 272 AAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331 |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 791 AAAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCC 850 Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 851 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 910 Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 |||||||||||||||||||||||||||||||||||||||| Sbjct 911 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 950 >seq81101 Length=5000 Score = 340 bits (376), Expect = 6e-91 Identities = 214/230 (93%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||||| Sbjct 4990 CTCCCACTTATGCTACACCTCTCATGTCTCTTCACAAAGTCAGACTAGAGTCAAGCTCAA 4931 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4930 CAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 4871 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4870 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 4811 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT--ACTCCCGCCGTTT 464 |||||||||||||||| ||||| |||||| | || ||| ||||| ||| Sbjct 4810 ACGAGGCATTTGGCTAACTTAAACGAGTCACAATTACACTTCCGCCATTT 4761 >seq43703 Length=504 Score = 327 bits (362), Expect = 4e-87 Identities = 192/199 (96%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||||| Sbjct 494 CTCCCACTTATGCTACACCTCTCATGTCTCTTCACAAAGTCAGACTAGAGTCAAGCTCAA 435 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 434 CAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 375 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 374 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 315 Query 417 ACGAGGCATTTGGCTACCT 435 ||||||||||||||||||| Sbjct 314 ACGAGGCATTTGGCTACCT 296 >seq37061 Length=1149 Score = 158 bits (174), Expect = 4e-36 Identities = 96/102 (94%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || Sbjct 407 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACAAGCGCTTGGTCGAATTTCTTCGCT 348 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| |||||||||||||||||||||||||||||| Sbjct 347 TTGACATTCATTGCACTGGGCAGAAATCACATTGCGTCAACA 306 >seq37060 Length=748 Score = 158 bits (174), Expect = 4e-36 Identities = 96/102 (94%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || Sbjct 407 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACAAGCGCTTGGTCGAATTTCTTCGCT 348 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| |||||||||||||||||||||||||||||| Sbjct 347 TTGACATTCATTGCACTGGGCAGAAATCACATTGCGTCAACA 306 >seq67150 Length=1221 Score = 136 bits (150), Expect = 1e-29 Identities = 84/90 (93%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 444 TCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGA 503 ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| Sbjct 1221 TCATAGTTACTCCCGCCGTTTACAAGCGCTTGGTCGAATTTCTTCGCTTTGACATTCATT 1162 Query 504 GCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||| Sbjct 1161 GCACTGGGCAGAAATCACATTGCGTCAACA 1132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633539536160