Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq97600 210 7e-52 seq56780 201 3e-49 seq40524 199 1e-48 seq98310 194 5e-47 seq56782 194 5e-47 seq40108 194 5e-47 seq56781 192 2e-46 seq51000 100 9e-19 >seq97600 Length=2317 Score = 210 bits (232), Expect = 7e-52 Identities = 147/166 (89%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 91 CTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT 150 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2149 CTGTTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT 2208 Query 151 AATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAG 210 ||||||||||||||||| |||||||||||| || ||||||||||| |||||||| Sbjct 2209 GATTCCCCGTTACCCGTTACAACCATGGTAGGCGCATAACCTACCATCGACAGTTGATAA 2268 Query 211 GGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATT 255 |||||| | ||||| || |||||||||| | ||||||||||||| Sbjct 2269 GGCAGACACTTGAAAGATTCATCGCCGGCACTTAGGCCATGCGATT 2314 >seq56780 Length=1425 Score = 201 bits (222), Expect = 3e-49 Identities = 134/149 (90%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 91 CTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 151 CTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT 92 Query 151 AATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAG 210 ||||||||||||||||| |||||||||||| || ||||||||||| |||||||| Sbjct 91 GATTCCCCGTTACCCGTTACAACCATGGTAGGCGCATAACCTACCATCGACAGTTGATAA 32 Query 211 GGCAGAAATTTGAATGAACCATCGCCGGC 239 |||||| | ||||| || |||||||||| Sbjct 31 GGCAGACACTTGAAAGATTCATCGCCGGC 3 >seq40524 Length=606 Score = 199 bits (220), Expect = 1e-48 Identities = 133/148 (90%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 92 TGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 457 TGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTG 516 Query 152 ATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGG 211 ||||||||||||||||| |||||||||||| || ||||||||||| |||||||| | Sbjct 517 ATTCCCCGTTACCCGTTACAACCATGGTAGGCGCATAACCTACCATCGACAGTTGATAAG 576 Query 212 GCAGAAATTTGAATGAACCATCGCCGGC 239 ||||| | ||||| || |||||||||| Sbjct 577 GCAGACACTTGAAAGATTCATCGCCGGC 604 >seq98310 Length=2364 Score = 194 bits (214), Expect = 5e-47 Identities = 130/145 (90%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 95 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2218 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT 2277 Query 155 CCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCA 214 |||||||||||||| |||||||||||| || ||||||||||| |||||||| |||| Sbjct 2278 CCCCGTTACCCGTTACAACCATGGTAGGCGCATAACCTACCATCGACAGTTGATAAGGCA 2337 Query 215 GAAATTTGAATGAACCATCGCCGGC 239 || | ||||| || |||||||||| Sbjct 2338 GACACTTGAAAGATTCATCGCCGGC 2362 >seq56782 Length=429 Score = 194 bits (214), Expect = 5e-47 Identities = 130/145 (90%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 95 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 147 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT 88 Query 155 CCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCA 214 |||||||||||||| |||||||||||| || ||||||||||| |||||||| |||| Sbjct 87 CCCCGTTACCCGTTACAACCATGGTAGGCGCATAACCTACCATCGACAGTTGATAAGGCA 28 Query 215 GAAATTTGAATGAACCATCGCCGGC 239 || | ||||| || |||||||||| Sbjct 27 GACACTTGAAAGATTCATCGCCGGC 3 >seq40108 Length=870 Score = 194 bits (214), Expect = 5e-47 Identities = 130/145 (90%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 95 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 724 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT 783 Query 155 CCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCA 214 |||||||||||||| |||||||||||| || ||||||||||| |||||||| |||| Sbjct 784 CCCCGTTACCCGTTACAACCATGGTAGGCGCATAACCTACCATCGACAGTTGATAAGGCA 843 Query 215 GAAATTTGAATGAACCATCGCCGGC 239 || | ||||| || |||||||||| Sbjct 844 GACACTTGAAAGATTCATCGCCGGC 868 >seq56781 Length=1502 Score = 192 bits (212), Expect = 2e-46 Identities = 129/144 (90%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 96 GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTC 155 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 146 GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTC 87 Query 156 CCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAG 215 ||||||||||||| |||||||||||| || ||||||||||| |||||||| ||||| Sbjct 86 CCCGTTACCCGTTACAACCATGGTAGGCGCATAACCTACCATCGACAGTTGATAAGGCAG 27 Query 216 AAATTTGAATGAACCATCGCCGGC 239 | | ||||| || |||||||||| Sbjct 26 ACACTTGAAAGATTCATCGCCGGC 3 >seq51000 Length=604 Score = 100 bits (110), Expect = 9e-19 Identities = 60/63 (95%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 92 TGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 128 TGCTGCCTTCCTTGGATGTGGTAGCCTTTTCTCAGGCTCCCTCTACGGAATCGAACCCTG 187 Query 152 ATT 154 ||| Sbjct 188 ATT 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508866264320