Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq95739 205 7e-48 seq96803 145 6e-30 seq77187 120 2e-22 seq94721 93.3 3e-14 >seq95739 Length=7868 Score = 205 bits (226), Expect = 7e-48 Identities = 608/914 (67%), Gaps = 39/914 (4%) Strand=Plus/Minus Query 61040 AAGAGAATC-CTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATG 61098 |||| ||| |||| ||||| || |||| || || |||||| | ||| | |||| ||| Sbjct 1213 AAGAAAATATCTCG-CGTTTTGTTGTGTTTCCAATTGAGTATTACGATTTATGGCAAATG 1155 Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT-TTGTCCAAAGACAT 61157 || ||||| | ||||||| || ||||| || |||||||| ||| ||| ||| | Sbjct 1154 TATAAAAAATCTCAAGCTTCGTTTTGGACAGTAGAGGAGGTTGATCTTG------GACGT 1101 Query 61158 GAA-----TGACTGGGAGCGTTTATCGA--GCGG-TGAACAACATTTCATTAAACATGTG 61209 || ||| ||| | || || |||| ||| |||| ||| || | ||| | Sbjct 1100 GATCGATTTGATTGGAATAACAAATTGAACGCGGATGAGCAACGTTT--TTTATCATATA 1043 Query 61210 TTGGCG--TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCG 61267 || || || |||||||| || || || || ||||| ||| | ||||| || Sbjct 1042 TTCTCGCATTTTTTGCCGCAAGTGATGGAATTGTTAATGAAAATCTCGCAGAACGATTTA 983 Query 61268 CGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGA 61327 | ||||| || || | || || |||||||| || || || || |||||||| || | Sbjct 982 TACGAGAGGTTCAGGTTACAGAAGCACGTTGTTTTTATGGATTTCAAATTGCCATTGAAA 923 Query 61328 ATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAG--GGAGCGGGCGGA 61385 |||| || || || ||||| | || | | || ||||| | | || | | Sbjct 922 ATGTGCATTCAGAAATGTATTCCATGCTTTTGCAAACATACATTGATTGCAACGAAC--A 865 Query 61386 ACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTG 61445 |||| | || || ||||| ||||| || | || || ||||| ||||| | || Sbjct 864 ACGTTTGCTTTTATTTAATGCAATCGAAACATTGCCATGTGTCAAGCGAAAAGCTCAGTG 805 Query 61446 GGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGC 61505 | | || ||||| | |||| || | | | ||| |||||| || | |||||||| Sbjct 804 GTCATTACGCTGGATTTCAAGTAGTACAGATTCGTTTTCTGAACGTTTAGTTGCATTTGC 745 Query 61506 GGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACG 61565 | ||||| ||| ||||||||||||| || ||||| || || |||||| | || |||| Sbjct 744 TGCTGTCGAAGGTATATTTTTCAGTGGTTCCTTTGCGGCCATATTTTGGATCAAACAACG 685 Query 61566 TGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 ||| | || | ||| |||| || |||||||| || || || || || || || | || Sbjct 684 TGGTATACTGTCTGGTTTGACTTTTAGCAATGAATTAATCTCTCGTGATGAAGGACTACA 625 Query 61626 TTGTGATTTTGC-TGTTTTGCTATTCAAACG--CTATCTGGT-GAATCGTCCGTCGGAGG 61681 ||||| ||||| ||| | | |||| || |||| | | || | | | | | | Sbjct 624 CTGTGACTTTGCATGTCTAG-TATTTCGTCGATATATCCGCTACAAACCT-AGCC--AAG 569 Query 61682 AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACG 61741 || | | || ||| |||| || || || || ||||| |||||||| | ||| | Sbjct 568 AGAAAATTAGCGAAATTATTCGAGAAGCCGTTTTAATTGAACAAGAATTTCTAATTGATG 509 Query 61742 CTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTG 61801 | || || || || | ||||||||||||||| || ||| ||||| |||||||||| Sbjct 508 CATTACCAGTTTCTTTAATCGGCATGAATTGTTCGCTTATGAAACAGTACATTGAATTTG 449 Query 61802 TTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATAC--GAAAAACCC 61859 ||||||| || | | || || || ||| | | ||| | | | |||| || Sbjct 448 TTGCCGATAAGCTTCTTATTGAATT-GGAATG-TCCAAAAATATTTTGCGTGGAAAATCC 391 Query 61860 ATTTGATTTCATGGA-CATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTG 61918 ||||||||| ||||| ||| ||||| |||| || || | ||||||||||| ||| | Sbjct 390 ATTTGATTTTATGGAGCAT-ATTTCATTGGAAGGAAAAAGCAATTTTTTCGAAAAAAAAG 332 Query 61919 TAGGCGACTATCAA 61932 | || || |||||| Sbjct 331 TTGGAGAGTATCAA 318 >seq96803 Length=7468 Score = 145 bits (160), Expect = 6e-30 Identities = 574/894 (64%), Gaps = 27/894 (3%) Strand=Plus/Plus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 ||||| || |||| || | || ||| | ||| | |||| ||||||||||| || || Sbjct 3259 CGTTTTGTGGTGTTTCCAGTAGAATATTACGATTTATGGCAAATGTACAAAAAAGCTCAA 3318 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGA-CTG---GGA 61169 ||||| || ||||| || ||||| || ||||| | ||| ||| | ||| ||| Sbjct 3319 GCTTCATTTTGGACAGTAGAGGAAGTTGATTT-----AGGACGTGATCGTGCTGATTGGA 3373 Query 61170 GCGTTTATCGAG---CGG-TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 | | | | ||| ||||| || |||| | || | | || || ||||||| Sbjct 3374 TCAATAAATTAAACCCGGATGAACGACGTTTCTTATCGTATATTCTTGCATTTTTTGCCG 3433 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 || || || | || ||||| ||| | ||||| || | ||||| || || Sbjct 3434 CTAGTGATGGAGTTGTTAATGAAAATCTTGCTGAACGATTTATACGAGAGGTTCAGGTTA 3493 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | || || ||||| || || || || || ||||| || |||||||| || || || |||| Sbjct 3494 CAGAAGCACGTTGCTTTTATGGATTTCAAATTGCGATTGAGAATGTGCATTCAGAAATGT 3553 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 | | || | | ||||| || || ||| | | || || |||| Sbjct 3554 ATTCATTACTTTTGCAAACGTATATTGATGACAAAAAAGAAAGAATGCTTTTATTTAATG 3613 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 | || || |||||||| || ||| || || | ||||| || ||||| | | Sbjct 3614 CAATTGAAACGATACCATGTGTCAAGAAAAAGGCACAATGGGCATTACGCTGGATTTCTA 3673 Query 61466 GTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTT 61525 || ||| | |||| |||||| || | ||||| || | || || || |||||| Sbjct 3674 ATAATTTAGCTTCTTTTGCTGAACGTTTAGTTGCATTCGCTGCTGTTGAAGGGATATTTT 3733 Query 61526 TCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGA 61585 | ||||| |||||||| | || |||||| | || |||| ||| | | | ||| ||| Sbjct 3734 TTAGTGGTTCGTTTGCATCTATATTTTGGATTAAACAACGCGGAATATTACGTGGTTTGA 3793 Query 61586 CCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC-TGTTTTG 61644 | || |||||||| | || || || || || || | |||||||||||||| ||| | | Sbjct 3794 CTTTTAGCAATGAACTAATTTCTCGTGATGAAGGATTACATTGTGATTTTGCATGTCTAG 3853 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT 61704 |||| ||| || | || ||| ||||| | | || ||| |||| Sbjct 3854 -TATTTCGACGATACATTCGCAACAAACCGAGCGAGGATAAAATAGTCGAAATTATTCGA 3912 Query 61705 GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGC 61764 || || || || ||||| |||||||| || ||| |||| || | || ||| Sbjct 3913 GAAGCCGTTTTAATTGAACAAGAATTTCTAGTGGATGCTCTGCCAGTTCGTTTAATTGGC 3972 Query 61765 ATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG---ACCGTCTGTTGG-- 61819 |||||||| ||| ||| ||||| ||||||| ||||| | | | ||| ||| Sbjct 3973 ATGAATTGCTCACTCATGAAACAGTACATTGAATACGTTGCTGATAAACTTCTCATGGAA 4032 Query 61820 -TCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878 | |||| || || || | | | || ||||||| |||||||| ||||| Sbjct 4033 TTAGATT---GTCCAAA---AATATTTCAGTCGGAAAACCCTTTTGATTTTATGGAGCAA 4086 Query 61879 ATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 ||||| |||| || || | ||||||||||| ||||| || || || |||||| Sbjct 4087 ATTTCATTGGAAGGAAAAAGTAATTTTTTCGAAAAACGAGTTGGAGAATATCAA 4140 >seq77187 Length=4015 Score = 120 bits (132), Expect = 2e-22 Identities = 199/287 (69%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 || || |||||| | || || || ||||||||||| ||| | || ||||||||||| || Sbjct 2963 GCCATATTTTGGCTCAAAAAGCGAGGACTTATGCCTGGTTTAACGTTCAGCAATGAACTG 3022 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTG 61662 || || |||||||| || | ||||| |||||||| |||||| ||||| || | Sbjct 3023 ATTTCGCGCGACGAAGGGCTTCATTGCGATTTTGCGTGTTTGCTGTTCAA---GTACATC 3079 Query 61663 GTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAA 61722 | ||| || | |||| | || | | ||| || |||||||| ||| ||| Sbjct 3080 GAGAACAAGCCCTATCAGGAAAGAGTCGCCCAAATTATTAAGGAGGCGGTGCTTATAGAA 3139 Query 61723 CAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATG 61782 |||||||| | || || || |||||||| ||||| || |||||||| | | ||||| Sbjct 3140 CAGGAATTCTTAACCGATGCGTTGCCCGTGAATCTCATTGGAATGAATTGCGAATTAATG 3199 Query 61783 TCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGG 61829 || ||||||| ||||| ||| | ||| | | || ||||| Sbjct 3200 AAAACTTACATTGAATACGTTGCGGACAGACTGCTCCTTGAATTGGG 3246 >seq94721 Length=6748 Score = 93.3 bits (102), Expect = 3e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 66287 GGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAAT 66346 ||||||| ||| |||||||| ||||||||| || | || ||||| ||||||||||| Sbjct 2487 GGACACTCGTGCGGACACATTAGCGACCAAACATCGTCAGCCTCTACGCGACGCATAAAC 2546 Query 66347 AGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCT-CAATGCCGTG 66405 | ||| || ||||| || | ||||||||||| | || || ||| | | | | ||| Sbjct 2547 AAATCCGGAATCCAAAGTCCATAGAAGAGATCTCTGGCGCGCAACTCTTCCGAACCGGTG 2606 Query 66406 ATTTTTGCGCAAG-TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGG 66464 | ||| ||| || || || || ||||| || || |||||||| |||| || || | Sbjct 2607 TTCTTT--TTAAGATCAAGAAATTCGAAGATATCTGCGTGCCATGGCTCCACATATATCG 2664 Query 66465 CGAA 66468 |||| Sbjct 2665 CGAA 2668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397075977918800