Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3854 87.8 3e-15 seq15576 82.4 1e-13 seq9844 82.4 1e-13 seq9398 82.4 1e-13 seq6005 82.4 1e-13 seq1761 82.4 1e-13 seq1034 82.4 1e-13 seq679 82.4 1e-13 seq1444 73.4 6e-11 >seq3854 Length=84955 Score = 87.8 bits (96), Expect = 3e-15 Identities = 93/118 (79%), Gaps = 10/118 (8%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTG-TC---TGACCAGG 56 |||||||||||||||| | ||| || | |||||| || | ||| || ||||||| Sbjct 76212 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTTCATGTGCCTGGTCGAGTGACCAG- 76268 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 76269 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 76323 Score = 82.4 bits (90), Expect = 1e-13 Identities = 92/118 (78%), Gaps = 10/118 (8%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTG-TC---TGACCAGG 56 |||||||||||||||| | ||| || | ||||| || | ||| || ||||||| Sbjct 68407 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCCTGGTCGAGTGACCAG- 68463 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 68464 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 68518 >seq15576 Length=778272 Score = 82.4 bits (90), Expect = 1e-13 Identities = 92/118 (78%), Gaps = 10/118 (8%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTG-TC---TGACCAGG 56 |||||||||||||||| | ||| || | ||||| || | ||| || ||||||| Sbjct 196481 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCCTGGTCGAGTGACCAG- 196537 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 196538 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 196592 >seq9844 Length=46398 Score = 82.4 bits (90), Expect = 1e-13 Identities = 92/118 (78%), Gaps = 10/118 (8%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTG-TC---TGACCAGG 56 |||||||||||||||| | ||| || | ||||| || | ||| || ||||||| Sbjct 30320 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCCTGGTCGAGTGACCAG- 30376 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 30377 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 30431 >seq9398 Length=37323 Score = 82.4 bits (90), Expect = 1e-13 Identities = 92/118 (78%), Gaps = 10/118 (8%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTG-TC---TGACCAGG 56 |||||||||||||||| | ||| || | ||||| || | ||| || ||||||| Sbjct 4778 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCCTGGTCGAGTGACCAG- 4722 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 4721 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 4667 >seq6005 Length=36425 Score = 82.4 bits (90), Expect = 1e-13 Identities = 92/118 (78%), Gaps = 10/118 (8%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTG-TC---TGACCAGG 56 |||||||||||||||| | ||| || | ||||| || | ||| || ||||||| Sbjct 3873 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCCTGGTCGAGTGACCAG- 3817 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 3816 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 3762 Score = 78.8 bits (86), Expect = 2e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 4834 CAGTGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 4777 >seq1761 Length=14764 Score = 82.4 bits (90), Expect = 1e-13 Identities = 92/118 (78%), Gaps = 10/118 (8%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTG-TC---TGACCAGG 56 |||||||||||||||| | ||| || | ||||| || | ||| || ||||||| Sbjct 13543 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCCTGGTCGAGTGACCAG- 13487 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 13486 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 13432 >seq1034 Length=610273 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | ||||| || | ||| || | |||| Sbjct 364492 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCCTGGTCGAGTGGCCAGT 364435 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||| ||||||| | |||||||| |||||||||||||||||||||||| Sbjct 364434 GGTGCGAAGATACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 364381 >seq679 Length=4797 Score = 82.4 bits (90), Expect = 1e-13 Identities = 92/118 (78%), Gaps = 10/118 (8%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTG-TC---TGACCAGG 56 |||||||||||||||| | ||| || | ||||| || | ||| || ||||||| Sbjct 1720 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCCTGGTCGAGTGACCAG- 1664 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 1663 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1609 >seq1444 Length=330149 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||||||| | |||||||||||||| ||||||||||||||||| Sbjct 198149 CAGTGGTGCGAAGCTACCATCAGTGGGATTATGGCTGAAATCCTCTAAGTCAGAATCC 198206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818655169792