Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq15467 109 4e-19 seq3821 93.3 3e-14 >seq15467 Length=153806 Score = 109 bits (120), Expect = 4e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 66037 CTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCC 66096 ||| ||| ||| | | ||||| |||||||| ||||| ||||||||||| ||||||| || Sbjct 76365 CTCATCATGAGAGCTGTACTCAACAATTTCAGTGCATAGATTACTGCACTGTATGGTTCC 76424 Query 66097 CAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCC 66156 ||||||| |||||| || ||||| || ||||| || |||| ||| || || || || Sbjct 76425 TAAATTCTTTTGATTTGATTTTCGATTACAAGCATCTTTATACAACATATATGGGGTTCC 76484 Query 66157 GGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 || |||| || || ||||| || || | ||| Sbjct 76485 TGTTTCAATCTGAGATTCAATAATTGCATACCA 76517 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 67061 GTCTGCTTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATGT 67120 |||| || |||| || || ||||| || || || || |||| ||||||| |||||| Sbjct 143710 GTCTCTTTATGCAGATTTGATATGGCAATGCGTGCAGCAAGGATGGCATAATCAGGATGT 143769 Query 67121 AGAGTCATCATACTGGCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACA 67180 || ||||| | || ||| |||| || |||||| ||||||||||| | || || ||| Sbjct 143770 TTTGTAGTCATAGTCGCTGCAATTTCTGCAGCCAAGTTATCAAGTTCAACAGTTGTAACA 143829 Query 67181 CCAGGATACAGGCCAGCAACGACTTT 67206 |||||||||| |||| | |||||| Sbjct 143830 CCAGGATACAAGCCATTTATGACTTT 143855 >seq3821 Length=102291 Score = 93.3 bits (102), Expect = 3e-14 Identities = 142/201 (71%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 61426 GTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGT 61485 |||||| |||||| |||||||| || |||||||| | ||| || | |||||| Sbjct 78504 GTGAAGAAGAAAGCTGATTGGGCTTTGAATTGGATTAATCATACGCATGCATCCTTTGGT 78445 Query 61486 GAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCA 61545 |||||| | | |||||||| | || || || |||| || ||| || ||||| | Sbjct 78444 GAACGAATCGTTGCATTTGCTGCTGTAGAAGGAATATTCTTTTCTGGTTCATTTGCATCC 78385 Query 61546 ATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATA 61605 || || ||| ||||||| | || | ||||| || || || || |||||||| |||||| Sbjct 78384 ATATTCTGGCTGAAGAAGAGAGGTTTAATGCCTGGCCTTACATTTAGCAATGAATTGATA 78325 Query 61606 TCACGCGACGAGGGCATGCAT 61626 || || || || |||||| Sbjct 78324 AGTCGAGATGA-GGTATGCAT 78305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397235351499920