Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq93 93.3 8e-17 >seq93 Length=1309504 Score = 93.3 bits (102), Expect = 8e-17 Identities = 141/194 (73%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTA 185 |||||||||||| |||| || | | |||||||||| |||||| ||| | | ||| Sbjct 570242 CATGGAATAATAAAATAAGATCT-CTGTTCTATTTTCATTGGTTGTTAGATCAAGGGGTA 570184 Query 186 ATGATTAATAGGGATAGTCGGG-GGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||| ||| || || | ||||| | |||||||| |||||||| Sbjct 570183 ATGATTAATAGAAGCAGTTTGGAGGCATTAGTATAACGACGCGAGAGGTGACATTCTTGG 570124 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 | ||||||||| |||||||| || |||| ||||||||||||||||| || Sbjct 570123 ACCGTCGTAAGACTAACATAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGA 570065 Query 305 ACGAAAGTTAGGGG 318 ||||||||||| || Sbjct 570064 ACGAAAGTTAGAGG 570051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915089791616