Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq231 246 5e-63 seq294 150 3e-34 >seq231 Length=859231 Score = 246 bits (272), Expect = 5e-63 Identities = 179/206 (87%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||| || |||||||||||||| ||| |||||||||||| ||||||||||| Sbjct 654478 GTCATTAGTAGTTTAGGACTAACCTGTCTCACGACTGTCTAAACCCAGTTCACGTTCCCT 654537 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | || |||||||||||||||||| ||||| |||||| |||| |||||||||| Sbjct 654538 TGCA-TGAGTGAACAATCCAACGCTTGGTGAATTTTGCTTCCCATTGATTGGAAGAGCCG 654596 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| Sbjct 654597 ACATCGAAGGATCAAAAAGCGACATCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 654656 Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235 |||||||||||||||||| || |||| Sbjct 654657 CCTGTGGTAACTTTTCTGACAGCTCT 654682 >seq294 Length=746123 Score = 150 bits (166), Expect = 3e-34 Identities = 109/126 (87%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 224979 CCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 225038 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||| ||||||| | ||| | | | |||||||||| Sbjct 225039 ATCCCTGTGGTAACTTTTCTGACACCTCTTGTTAAAAACTCCTTAAACCAAAAGGATCGA 225098 Query 267 TAGGCC 272 |||||| Sbjct 225099 TAGGCC 225104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854297113152