Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stomoxys_20calcitrans_20[refseq_20GCF_5F001015335.1_202015-05-31] 12,042 sequences; 971,188,624 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq589 140 1e-30 seq286 109 2e-21 >seq589 Length=497671 Score = 140 bits (154), Expect = 1e-30 Identities = 112/135 (83%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 458118 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTTCCCGTTACCCGTTGTAACCATGG 458059 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||| || || | |||||| || ||||||||| |||| ||||||| || | ||| ||| Sbjct 458058 TAGTCCTAGATACCACCATCAAATGTTGATAGGTCAGACATTTGAAAGATCTGTCGTCGG 457999 Query 239 CTCAAGGCCATGCGA 253 | || |||| ||| Sbjct 457998 TACGAGACCATACGA 457984 >seq286 Length=690019 Score = 109 bits (120), Expect = 2e-21 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||| ||||||||| || || ||||||| || || | | | |||||||||||| Sbjct 12416 ATAACTGATATAATGAGCCTTTTGCGGTTTCACGGT-TAATTCGTGTGTACTTAGACATG 12358 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| ||| |||||| |||| Sbjct 12357 CATGGCTTAATCTTTGAGACAAGCGTATAACTACTAGCAG 12318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510218117632