Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3498 185 1e-44 seq13104 179 6e-43 >seq3498 Length=1779 Score = 185 bits (204), Expect = 1e-44 Identities = 181/227 (80%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||| |||||| | Sbjct 1404 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT--ATGACTCGCGCTTACTGGGAATT-C 1460 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | | |||| ||| | ||||| ||||||| | | ||||| | || Sbjct 1461 CTCGTTCACGGAGGATAATTTCAAGCTCCGATCCCTATCACGAAGGAGGTTCAACGGGTT 1520 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| | ||| ||| | || || | || || ||| | | |||||||||||||||||| Sbjct 1521 ACCCAGTCCTTCCGGACCGGGAGAGAACACACGCTGATTCCTTCAGTGTAGCGCGCGTGC 1580 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 1581 GGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 1626 >seq13104 Length=7246 Score = 179 bits (198), Expect = 6e-43 Identities = 174/219 (79%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| |||||||| | ||||| |||||| | Sbjct 5072 GTACAAAGGGCAGGGACGTAATCAATTTGAGCT-GATGACTCAAGTTTACTGGGAATT-C 5129 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||||||| ||| |||| ||||| ||||||| |||| | | | |||||| || || Sbjct 5130 CTCGTTGAAGGGCAATAATTTCAATGCCCTATCCCAATCATGGTAAGTTTTCAATAGTTT 5189 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | || || |||| | ||| || ||| | |||||||||||||||||| Sbjct 5190 ACCCAAGCTTTTCAGCTAAGG--AAGGACGCGCTGATCTTACCAGTGTAGCGCGCGTGCG 5247 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 |||| | ||||| |||||||||||||||||||||||||| Sbjct 5248 GCCCCGGACATCGAAGGGCATCACAGACCTGTTATTGCC 5286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751892626385