Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3446 86.0 3e-15 seq3307 86.0 3e-15 seq4123 73.4 2e-11 >seq3446 Length=1126 Score = 86.0 bits (94), Expect = 3e-15 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| ||||||| ||| || | Sbjct 628 GAACCCAAACACTTTGGTTTCCCGGAAGCTGCCCGCCGAGTCATCGGAGGAACTCCGGCG 687 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| || |||||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 688 GATCGCTGGTCGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 744 >seq3307 Length=1370 Score = 86.0 bits (94), Expect = 3e-15 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| ||||||| ||| || | Sbjct 805 GAACCCAAACACTTTGGTTTCCCGGAAGCTGCCCGCCGAGTCATCGGAGGAACTCCGGCG 746 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| || |||||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 745 GATCGCTGGTCGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 689 >seq4123 Length=1204 Score = 73.4 bits (80), Expect = 2e-11 Identities = 84/113 (74%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATC 64 ||||| |||||| |||| || ||| |||| ||||||| ||| || | |||| Sbjct 1 CCAAACACTTTGGTTTCCCGGAAGCTGCCCGCCGAGTCATCGGAGGAACTCCGGCGGATC 60 Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||||||| ||||| ||||| |||| | ||||||||||||| || ||| Sbjct 61 GCTGGTCGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTCCGA 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278361531210