Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4123 214 3e-53 seq3446 214 3e-53 seq3307 214 3e-53 seq3796 206 5e-51 seq4003 192 1e-46 seq13104 138 2e-30 seq10905 93.3 8e-17 seq14038 82.4 1e-13 seq12936 77.0 6e-12 seq14015 75.2 2e-11 seq8620 73.4 7e-11 >seq4123 Length=1204 Score = 214 bits (236), Expect = 3e-53 Identities = 222/288 (77%), Gaps = 10/288 (3%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| |||||| | |||| ||| || | || ||||||||||| ||||||||||| | Sbjct 400 ATGCTCTTCACCGAGTGTCTTGGGTGACCGGAACCTTTACTTTGAACAAATTAGAGTGCT 341 Query 99 CAAAGCAGGCCTTT------GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 | |||||||| || || || ||| ||||||||||||| ||||||||| | | Sbjct 340 CCAAGCAGGCGTTCAAACACGCCCGTATAGCCCAGCATGGAATAATGGAATAGGACCT-C 282 Query 153 GGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 ||||||||||||||||||| | ||| ||| ||||||||||||||||| | |||||| Sbjct 281 GGTTCTATTTTGTTGGTTTTTCGGAACCCGAGGTAATGATTAATAGGGACGGACGGGGGC 222 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| | |||||||||||||||||| | ||||| |||||||||||| Sbjct 221 ATTCGTATTGCGGCGCTAGAGGTGAAATTCTTGGACCGTTGCAAGACGAACTACTGCGAA 162 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || ||||| |||||||||||||||| ||||||||||||| || Sbjct 161 AGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 115 >seq3446 Length=1126 Score = 214 bits (236), Expect = 3e-53 Identities = 222/288 (77%), Gaps = 10/288 (3%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| |||||| | |||| ||| || | || ||||||||||| ||||||||||| | Sbjct 1031 ATGCTCTTCACCGAGTGTCTTGGGTGACCGGAACCTTTACTTTGAACAAATTAGAGTGCT 972 Query 99 CAAAGCAGGCCTTT------GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 | |||||||| || || || ||| ||||||||||||| ||||||||| | | Sbjct 971 CCAAGCAGGCGTTCAAACACGCCCGTATAGCCCAGCATGGAATAATGGAATAGGACCT-C 913 Query 153 GGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 ||||||||||||||||||| | ||| ||| ||||||||||||||||| | |||||| Sbjct 912 GGTTCTATTTTGTTGGTTTTTCGGAACCCGAGGTAATGATTAATAGGGACGGACGGGGGC 853 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| | |||||||||||||||||| | ||||| |||||||||||| Sbjct 852 ATTCGTATTGCGGCGCTAGAGGTGAAATTCTTGGACCGTTGCAAGACGAACTACTGCGAA 793 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || ||||| |||||||||||||||| ||||||||||||| || Sbjct 792 AGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 746 >seq3307 Length=1370 Score = 214 bits (236), Expect = 3e-53 Identities = 222/288 (77%), Gaps = 10/288 (3%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| |||||| | |||| ||| || | || ||||||||||| ||||||||||| | Sbjct 402 ATGCTCTTCACCGAGTGTCTTGGGTGACCGGAACCTTTACTTTGAACAAATTAGAGTGCT 461 Query 99 CAAAGCAGGCCTTT------GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 | |||||||| || || || ||| ||||||||||||| ||||||||| | | Sbjct 462 CCAAGCAGGCGTTCAAACACGCCCGTATAGCCCAGCATGGAATAATGGAATAGGACCT-C 520 Query 153 GGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 ||||||||||||||||||| | ||| ||| ||||||||||||||||| | |||||| Sbjct 521 GGTTCTATTTTGTTGGTTTTTCGGAACCCGAGGTAATGATTAATAGGGACGGACGGGGGC 580 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| | |||||||||||||||||| | ||||| |||||||||||| Sbjct 581 ATTCGTATTGCGGCGCTAGAGGTGAAATTCTTGGACCGTTGCAAGACGAACTACTGCGAA 640 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || ||||| |||||||||||||||| ||||||||||||| || Sbjct 641 AGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 687 >seq3796 Length=1019 Score = 206 bits (228), Expect = 5e-51 Identities = 222/289 (77%), Gaps = 11/289 (4%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| |||||| | |||| ||| || | || ||||||||||| ||||||||||| | Sbjct 346 ATGCTCTTCACCGAGTGTCTTGGGTGACCGGAACCTTTACTTTGAACAAATTAGAGTGCT 287 Query 99 CAAAGCAGGCCTTT------GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 | |||||||| || || || ||| ||||||||||||| ||||||||| | | Sbjct 286 CCAAGCAGGCGTTCAAACACGCCCGTATAGCCCAGCATGGAATAATGGAATAGGACCT-C 228 Query 153 GGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATTAATAGGG-ATAGTCGGGGG 209 ||||||||||||||||||| | ||| ||| |||||||||||||||| | | |||||| Sbjct 227 GGTTCTATTTTGTTGGTTTTTCGGAACCCGAGGTAATGATTAATAGGGGACGGACGGGGG 168 Query 210 TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGA 269 | ||||| | |||||||||||||||||| | ||||| ||||||||||| Sbjct 167 CATTCGTATTGCGGCGCTAGAGGTGAAATTCTTGGACCGTTGCAAGACGAACTACTGCGA 108 Query 270 AAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||| || ||||| |||||||||||||||| ||||||||||||| || Sbjct 107 AAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 60 >seq4003 Length=1017 Score = 192 bits (212), Expect = 1e-46 Identities = 206/271 (76%), Gaps = 10/271 (4%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| |||||| | |||| ||| || | || ||||||||||| ||||||||||| | Sbjct 742 ATGCTCTTCACCGAGTGTCTTGGGTGACCGGAACCTTTACTTTGAACAAATTAGAGTGCT 801 Query 99 CAAAGCAGGCCTTT------GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 | |||||||| || || || ||| ||||||||||||| ||||||||| | | Sbjct 802 CCAAGCAGGCGTTCAAACACGCCCGTATAGCCCAGCATGGAATAATGGAATAGGACCT-C 860 Query 153 GGTTCTATTTTGTTGGTTTCTAGGA---CCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 ||||||||||||||||||| | || ||| ||||||||||||||||| | |||||| Sbjct 861 GGTTCTATTTTGTTGGTTTTTCGGTAACCCGAGGTAATGATTAATAGGGACGGACGGGGG 920 Query 210 TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGA 269 | ||||| | |||||||||||||||||| | ||||| ||||||||||| Sbjct 921 CATTCGTATTGCGGCGCTAGAGGTGAAATTCTTGGACCGTTGCAAGACGAACTACTGCGA 980 Query 270 AAGCGTTCACCAAGGATGTTTTCATTAATCA 300 |||| || ||||| |||||||||||||||| Sbjct 981 AAGCATTTGCCAAGAATGTTTTCATTAATCA 1011 >seq13104 Length=7246 Score = 138 bits (152), Expect = 2e-30 Identities = 180/244 (74%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||| ||||| || | || |||||| | |||| ||||| || || |||||||| Sbjct 5951 TTACCTTGAATAACTCAGGTTGTTCATAAAAGGCTTTTGCCTATATGATTTTGCATGGAA 5892 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 |||| ||||| ||| | |||| || |||||||||| | || ||||| ||||||||||| Sbjct 5891 TAATGGAATAAGAC-TCCGGT-CTGTTTTGTTGGTCT-TAAGACCGTTGTAATGATTAAA 5835 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 |||||| | ||||| || |||| | | |||||||||||||||||| | Sbjct 5834 AGGGATTGACGGGGACATCCGTATCGATGCGCGAGAGGTGAAATTCTTGGACCGCATCGG 5775 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| ||||||||||||| || |||| |||| ||||||||||| |||||||||| | Sbjct 5774 GACGTCCTACTGCGAAAGCATTTGTCAAGAATGTCTTCATTAATCA-AGAACGAAAGTCA 5716 Query 315 GGGG 318 | || Sbjct 5715 GAGG 5712 >seq10905 Length=25374 Score = 93.3 bits (102), Expect = 8e-17 Identities = 74/88 (84%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 231 GGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTT 290 ||||||||||||||| | ||||| ||||||||||||||| || ||||| |||||| Sbjct 24989 GGTGAAATTCTTGGACCGTTGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTT 24930 Query 291 TCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||| ||||||||||||| || Sbjct 24929 TCATTAATCA-AGAACGAAAGTTAGAGG 24903 >seq14038 Length=425324 Score = 82.4 bits (90), Expect = 1e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 |||||||||||||||||| | ||||| ||||||||||||||| || ||||| ||| Sbjct 304844 AGAGGTGAAATTCTTGGACCGTTGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATG 304785 Query 288 TTTTCATTAATCA 300 ||||||||||||| Sbjct 304784 TTTTCATTAATCA 304772 >seq12936 Length=845941 Score = 77.0 bits (84), Expect = 6e-12 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||||||||| | || ||||| ||||||| | ||||| || ||||| ||| | Sbjct 772964 AGGTGAAATTCTTGGACTGTTTCAAGACGAACTACTACCAAAGCATTTGCCAAGAATG-T 773022 Query 290 TTCATTAATCAGTGAACGAAAGTT 313 ||||||||||| |||| |||||| Sbjct 773023 TTCATTAATCA-AGAACAAAAGTT 773045 >seq14015 Length=148239 Score = 75.2 bits (82), Expect = 2e-11 Identities = 70/88 (80%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 ||| ||||||||| |||| | | ||||| |||||||||||| || || |||| ||| Sbjct 90312 AGAAGTGAAATTCATGGACTGTTGCAAGACGAACTACTGCGAAGGCATTTGTCAAGAATG 90371 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAG 315 |||||| |||| || |||||||||||| Sbjct 90372 TTTTCAATAATTAG-AAACGAAAGTTAG 90398 >seq8620 Length=19284 Score = 73.4 bits (80), Expect = 7e-11 Identities = 53/60 (88%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 259 AACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||||| || ||||| |||||||||||||||| ||||||||||||| || Sbjct 16326 AACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 16384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915065108672