Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq3688 452 1e-124 >seq3688 Length=1697 Score = 452 bits (500), Expect = 1e-124 Identities = 411/508 (81%), Gaps = 20/508 (4%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1050 TACGGTCGCAAGATTAAAACTTAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 1109 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||| ||||||| || ||| | Sbjct 1110 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGATTTGACATA-TC-GAC---TA 1164 Query 121 TAGAGAT-AGAGGT------TTCCCCTTCGG--GGGACAGAGTGACAGGTGATGCATGGT 171 |||| | |||| | || | ||||| ||| | || ||||||| ||||||| Sbjct 1165 TAGATGTGAGAGATCATATTTTTCAGTTCGGCTGGGTCGGAT--ACAGGTGCTGCATGGC 1222 Query 172 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAG 231 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1223 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCTTAAACGAGCGCAACCCTTGTT 1282 Query 232 CTTAGTTGCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGG 289 |||||||||| || ||||| |||| ||||||| ||||||||||| || ||||||| Sbjct 1283 TTTAGTTGCCAGCAGGTTAAGCTGGGTACTCTAAAGAAACTGCCGGTGATAAGCCGGAGG 1342 Query 290 AAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACA 349 |||| ||||| |||||||| || ||||| |||||||| ||||||||||| |||||||| Sbjct 1343 AAGGCGGGGATGACGTCAAGTCCTCATGGCCCTTATGTCCTGGGCTACACATGTGCTACA 1402 Query 350 ATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTC 409 |||| |||||| | || || | | |||| ||| |||| | |||| |||| Sbjct 1403 ATGGTAGTGACAAAGAGTTGCAAACCTGTGAGGGTGAGCTAATCTC-TAAACACTATCTC 1461 Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATC-GTAGA 468 ||||||||||| | |||| ||||||| | |||||| |||||||||||||||| ||||| Sbjct 1462 AGTTCGGATTGCACTCTGAAACTCGAGTGCATGAAGTCGGAATCGCTAGTAATCAGTAGA 1521 Query 469 TCAGCATGCTACGGTGAATACGTTCCCG 496 |||||||||||||||||||||||||||| Sbjct 1522 TCAGCATGCTACGGTGAATACGTTCCCG 1549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503778325440