Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq12062 360 3e-97 seq11882 360 3e-97 seq13104 358 1e-96 seq3526 358 1e-96 seq11759 208 1e-51 seq13921 196 8e-48 seq14041 120 5e-25 seq13868 111 3e-22 seq13998 104 4e-20 seq13187 84.2 4e-14 >seq12062 Length=1123 Score = 360 bits (398), Expect = 3e-97 Identities = 261/297 (88%), Gaps = 5/297 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||| | || | |||| |||||||||||||||||||||||||||||| Sbjct 1064 TACTGAGCAGGATTTCTATCGCAACGACCAGTCATCAGTAGGGTAAAACTAACCTGTCTC 1005 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1004 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 945 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA-AAAAGCAACGTCGCT 178 |||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 944 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAAGCGACGTCGCT 885 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 884 ATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG- 826 Query 239 CTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 || ||| ||| | | | |||||||||||||||||| ||||| ||| |||||| Sbjct 825 CTAAAAACTCGTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCGCGGTCCGTATTC 769 >seq11882 Length=1268 Score = 360 bits (398), Expect = 3e-97 Identities = 261/297 (88%), Gaps = 5/297 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||| | || | |||| |||||||||||||||||||||||||||||| Sbjct 199 TACTGAGCAGGATTTCTATCGCAACGACCAGTCATCAGTAGGGTAAAACTAACCTGTCTC 258 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 259 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 318 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAG-CAACGTCGCT 178 |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 319 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGACGACGTCGCT 378 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 379 ATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG- 437 Query 239 CTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 || ||| ||| | | | |||||||||||||||||| ||||| ||| |||||| Sbjct 438 CTAAAAACTCGTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCGCGGTCCGTATTC 494 >seq13104 Length=7246 Score = 358 bits (396), Expect = 1e-96 Identities = 234/258 (91%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1008 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 1067 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1068 TGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 1127 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1128 GAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 1187 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||||| |||||| | | | ||| | || | ||||||||||||||||| Sbjct 1188 GGTAACTTTTCTGACACCTCAAACTTGAAACCATCAAGGTTTTAAGGATCGATAGGCCAC 1247 Query 275 ACTTTCATGGTTTGTATT 292 ||||| ||| |||||| Sbjct 1248 GCTTTCGCGGTCTGTATT 1265 >seq3526 Length=1022 Score = 358 bits (396), Expect = 1e-96 Identities = 260/296 (88%), Gaps = 5/296 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||| | || | |||| |||||||||||||||||||||||||||||| Sbjct 369 TACTGAGCAGGATTTCTATCGCAACGACCAGTCATCAGTAGGGTAAAACTAACCTGTCTC 428 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 429 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTGGC-G 487 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 488 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 547 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | | Sbjct 548 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG-C 606 Query 240 TCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| ||| | | | |||||||||||||||||| ||||| ||| |||||| Sbjct 607 TAAAAACTCGTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCGCGGTCCGTATTC 662 >seq11759 Length=1188 Score = 208 bits (230), Expect = 1e-51 Identities = 154/176 (88%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAA-GCGACGTCGCTA 59 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | | Sbjct 60 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG-C 118 Query 240 TCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| ||| | | | |||||||||||||||||| ||||| ||| |||||| Sbjct 119 TAAAAACTCGTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCGCGGTCCGTATTC 174 >seq13921 Length=47688 Score = 196 bits (216), Expect = 8e-48 Identities = 140/161 (87%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 40 GGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGT 99 ||| | | ||||||||||||| ||| ||||||||||||||||||||| ||||||||||| Sbjct 13381 GGGAATATCTAACCTGTCTCAGGACAGTCTAAACCCAGCTCACGTTCATTATTAGTGGGT 13322 Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 ||||||||| ||||| |||||||||||| | ||||||||||||||||| |||||||| Sbjct 13321 TAACAATCCATCGCTTGGCGAATTCTGCTTTGCAATGATAGGAAGAGCCGATATCGAAGG 13262 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAG 200 || ||||||| | || |||| ||||||||| |||||||||| Sbjct 13261 ATTAAAAAGCGATGTTGCTAAGAACGCTTGCCTGCCACAAG 13221 >seq14041 Length=382490 Score = 120 bits (132), Expect = 5e-25 Identities = 80/89 (90%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 |||||||| |||| |||||||||||||| |||||||||||||||||||| ||||||| Sbjct 105100 CAATCCAATGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATGAAAGGATC 105159 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGC 191 ||||||||| |||||||||||| |||||| Sbjct 105160 AAAAAGCAATGTCGCTATGAACACTTGGC 105188 >seq13868 Length=322100 Score = 111 bits (122), Expect = 3e-22 Identities = 102/128 (80%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 |||||| | ||| ||||||||||| ||||||||||||||| || ||||||||||||||| Sbjct 97239 AGCAACATTGCTGTGAACGCTTGGTCGCCACAAGCCAGTTAGCCATGTGGTAACTTTTCT 97298 Query 227 GGCACCTCTAGCCTCAAA-TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGT 285 | ||| ||| || ||| || | | | ||||||||||||||| || ||||| ||| Sbjct 97299 GACACTTCTTGCTAAAAACTTGTTAAAGTCAAAAGGATCGATAGGCTACTCTTTCGCGGT 97358 Query 286 TTGTATTC 293 ||||||| Sbjct 97359 CTGTATTC 97366 >seq13998 Length=177781 Score = 104 bits (114), Expect = 4e-20 Identities = 83/98 (85%), Gaps = 3/98 (3%) Strand=Plus/Plus Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||| Sbjct 101922 CGTCGCTACGAACGCTTGGCTGCCACGAGCCAGTTATCCCTGCGGTAACTTTTCTGACAC 101981 Query 232 CTCTAGCCTCAAATTTCG--AGGGACTAAAGGATCGAT 267 |||| | || ||| ||| | | | ||||||||||| Sbjct 101982 CTCTTG-CTAAAAACTCGTTAAAGTCAAAAGGATCGAT 102018 >seq13187 Length=97718 Score = 84.2 bits (92), Expect = 4e-14 Identities = 92/121 (76%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG 97 || ||||||| |||| | |||| | ||||||| |||| | |||| |||| | | Sbjct 28077 TATGGTAAAAATAACTCGACTCAAAATAGTCTAAATTTAGCTAATGTTCTTTATTGCTAG 28018 Query 98 GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157 | ||||||||||||||| |||||||||||| | ||||||| ||||| ||| |||||| Sbjct 28017 -TAAACAATCCAACGCTTGACGAATTCTGCTTTGCAATGATAGAAAGAGTCGATATCGAA 27959 Query 158 G 158 | Sbjct 27958 G 27958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854274069984