Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq4123 84.2 3e-14 seq4003 84.2 3e-14 seq3796 84.2 3e-14 seq3446 84.2 3e-14 seq3307 84.2 3e-14 >seq4123 Length=1204 Score = 84.2 bits (92), Expect = 3e-14 Identities = 87/113 (77%), Gaps = 7/113 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| ||||||||||||| ||| |||||| Sbjct 263 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTGGGCTATACGGGCG 321 Query 70 T------AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | | |||||||| || ||||||||||| |||| ||||| || | ||| Sbjct 322 TGTTTGAACGCCTGCTTGGAGCACTCTAATTTGTTCAAAGTAAAGGTTCCGGT 374 >seq4003 Length=1017 Score = 84.2 bits (92), Expect = 3e-14 Identities = 87/113 (77%), Gaps = 7/113 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| ||||||||||||| ||| |||||| Sbjct 879 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTGGGCTATACGGGCG 821 Query 70 T------AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | | |||||||| || ||||||||||| |||| ||||| || | ||| Sbjct 820 TGTTTGAACGCCTGCTTGGAGCACTCTAATTTGTTCAAAGTAAAGGTTCCGGT 768 >seq3796 Length=1019 Score = 84.2 bits (92), Expect = 3e-14 Identities = 87/113 (77%), Gaps = 7/113 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| ||||||||||||| ||| |||||| Sbjct 209 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTGGGCTATACGGGCG 267 Query 70 T------AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | | |||||||| || ||||||||||| |||| ||||| || | ||| Sbjct 268 TGTTTGAACGCCTGCTTGGAGCACTCTAATTTGTTCAAAGTAAAGGTTCCGGT 320 >seq3446 Length=1126 Score = 84.2 bits (92), Expect = 3e-14 Identities = 87/113 (77%), Gaps = 7/113 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| ||||||||||||| ||| |||||| Sbjct 894 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTGGGCTATACGGGCG 952 Query 70 T------AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | | |||||||| || ||||||||||| |||| ||||| || | ||| Sbjct 953 TGTTTGAACGCCTGCTTGGAGCACTCTAATTTGTTCAAAGTAAAGGTTCCGGT 1005 >seq3307 Length=1370 Score = 84.2 bits (92), Expect = 3e-14 Identities = 87/113 (77%), Gaps = 7/113 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| ||||||||||||| ||| |||||| Sbjct 539 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTGGGCTATACGGGCG 481 Query 70 T------AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | | |||||||| || ||||||||||| |||| ||||| || | ||| Sbjct 480 TGTTTGAACGCCTGCTTGGAGCACTCTAATTTGTTCAAAGTAAAGGTTCCGGT 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595115014926