Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq3688 226 5e-57 >seq3688 Length=1697 Score = 226 bits (250), Expect = 5e-57 Identities = 220/282 (78%), Gaps = 1/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||| || ||| |||| ||||||||||| ||||| | |||||||||| |||| | Sbjct 935 CCCACACTCTCGTGCCTTAGCGTCAGTTATGTTCCAGATAGATGCCTTCGCCATTGGTAT 876 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| ||||||||| |||| ||| |||||| |||||||| | ||||||| || Sbjct 875 TCCTCCGAATATCTACGAATTTTACCTCTACACTCGGAATTCTACTATCCTCTCCCATAC 816 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | |||| ||||| |||| | | ||||| || || |||||||||||||| Sbjct 815 TCTAGTTAGTCAGTATCAAACGCAGTTTCCAGTTTGAGACCGGAGATTTCACATCTGACT 756 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | || |||||||| | | |||||| |||| ||| |||| | |||||||||| ||| || Sbjct 755 TAACTAACCGCCTACGCACTCTTTACGCCCAGTAATTCCGAACAACGCTTGCC-CCTTCG 697 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| |||| |||| ||||| ||| Sbjct 696 TATTACCGCGGCTGCTGGCACGAAGTTTGCCGGGGCTTCTTC 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828681660569