Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq3688 255 1e-65 >seq3688 Length=1697 Score = 255 bits (282), Expect = 1e-65 Identities = 304/412 (74%), Gaps = 34/412 (8%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||||||||||||||||| |||||| ||| |||| |||||| || | ||||| Sbjct 619 CTTTACAACCCGAAGGCCTTCTTCACTCACGCGACATTGCTGGATCAGGGTTCCCCCCAT 560 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 559 TGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGTG 500 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| || |||||||| | |||||| |||| |||||| ||| || |||||| || Sbjct 499 TGGCTGATCTTCCTCTCAAAACAGCTACCGATCATCGCCTTGGTAAGCTCTTACCCTACC 440 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 |||||||||||| | || ||||| ||| | || || | |||||| Sbjct 439 AACTAGCTAATCGGACGCAGGCTCATC--ATA-----AAGC----AGAT--TTCTCTTTT 393 Query 244 GTCTTGCGACG-TTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGG 302 | | | | |||| |||||||||| | |||||||| ||||||||| || | || Sbjct 392 CCCCCTCAAGGATTATCCGGTATTAGCTATCGTTTCCAACAGTTATCCCCGTCTCTATGG 333 Query 303 CAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCC 362 || |||||| |||||||||||| || ||| | | ||| || Sbjct 332 TAGATTCCCACGTGTTACTCACCCGTTTGCTACTAG--------------ACTTGCGTC- 288 Query 363 TGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| |||||||||||||| || |||||||||||||| |||||| Sbjct 287 -----TCGTTCAACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGTTCTGAG 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222219830464