Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq3688 369 1e-99 >seq3688 Length=1697 Score = 369 bits (408), Expect = 1e-99 Identities = 289/343 (84%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || ||||| |||||||||||||||| ||||| |||||||||||||| |||| ||||| | Sbjct 419 CCTGCGTCCGATTAGCTAGTTGGTAGGGTAAGAGCTTACCAAGGCGATGATCGGTAGCTG 478 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 ||||||| |||| |||||| ||||||||||| |||||||| ||||||||||||||| Sbjct 479 TTTTGAGAGGAAGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGC 538 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||| ||| |||||||| || |||||| |||||| | |||||||| || Sbjct 539 AGCAGTGGGGAATTTTGGACAATGGGGGGAACCCTGATCCAGCAATGTCGCGTGAGTGAA 598 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 |||||||||||||| |||||||||| || | |||||| ||||||||| | || | Sbjct 599 GAAGGCCTTCGGGTTGTAAAGCTCTTTCACTGATGAAGATGATGACGGTAATCAGAGAAG 658 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||||||||| |||| |||||||||||||||||||||||| | ||||| |||||| | || Sbjct 659 AAGCCCCGGCAAACTTCGTGCCAGCAGCCGCGGTAATACG-AAGGGGCAAGCGTTGTTCG 717 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||||| |||||||||| ||||||||| |||| ||||||| Sbjct 718 GAATTACT-GGGCGTAAAGAGTGCGTAGGCGGTTAGTTAAGTC 759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497379268736