Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq3688 345 1e-92 >seq3688 Length=1697 Score = 345 bits (382), Expect = 1e-92 Identities = 320/401 (80%), Gaps = 5/401 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || ||||||||||| |||| |||||||||||||||||||||||| ||||| | |||||| Sbjct 655 GAAGAAGCCCCGGCAAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGG-CAAGCGTTG 713 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||||||||||||||| ||||||||| |||| |||||||||| |||||| || Sbjct 714 TTCGGAATTACTGGGCGTAAAGAGTGCGTAGGCGGTTAGTTAAGTCAGATGTGAAA-TCT 772 Query 129 ATGG-CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGT 187 || ||||| | | ||||| ||||| |||| ||||||| |||| || ||| Sbjct 773 CCGGTCTCAAACTGGAAACTGCGTTTGATACTGACTAACTAGAGTATGGGAGAGGATAGT 832 Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 ||||||| ||||||| ||| |||| |||||||||| ||||||| |||| |||||||||| Sbjct 833 AGAATTCCGAGTGTAGAGGTAAAATTCGTAGATATTCGGAGGAATACCAATGGCGAAGGC 892 Query 248 GGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 || ||||| |||||||| || |||| ||| || |||||||||||||||||||||| Sbjct 893 ATCTATCTGGAACATAACTGACGCTAAGGCACGAGAGTGTGGGGAGCAAACAGGATTAGA 952 Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCC 367 |||||||||||||||| ||||||||||||| | || | ||| || | |||| | | Sbjct 953 TACCCTGGTAGTCCACACCGTAAACGATGAGTGCTGGATGTTGGTAAGAATAATT--ATC 1010 Query 368 GGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| | ||| |||||| |||| | ||| |||| |||||| Sbjct 1011 AGTGTCTGAGCTAACGCATTAAGCACTCCGCCTGAGGAGTA 1051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203022660352