Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq13104 95.1 2e-17 seq11882 86.0 1e-14 seq3526 86.0 1e-14 seq14072 73.4 6e-11 >seq13104 Length=7246 Score = 95.1 bits (104), Expect = 2e-17 Identities = 93/115 (81%), Gaps = 4/115 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGC-AG 59 |||||||||||||| |||||| |||||||| ||||||| | || |||| | Sbjct 975 GTACGAGAGGAACCATATG-TTCAGAC-AATTGGTTCATGCGGCTAGCCGAA-AGGCTAA 919 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||| ||||||||| ||||||| |||||||| ||||| |||||||||||||||||| Sbjct 918 TGCTGCGAAGCTATCATCTGCGGGATTATGACTGAAAGCCTCTAAGTCAGAATCC 864 >seq11882 Length=1268 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||| || | || | || | |||| Sbjct 201 GTACGAGAGGAACCGCAGG-TTCGGAC-AATTGGCACGTGTGCTTGGCCGAGAGGCCAGT 144 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 143 GGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 90 >seq3526 Length=1022 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||| || | || | || | |||| Sbjct 371 GTACGAGAGGAACCGCAGG-TTCGGAC-AATTGGCACGTGTGCTTGGCCGAGAGGCCAGT 314 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 313 GGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 260 >seq14072 Length=410468 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||||||| | |||||||| |||||| ||||||||||||||||| Sbjct 150116 CAGTGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACACCTCTAAGTCAGAATCC 150059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819083031296