Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq13941 159 3e-34
seq13338 138 9e-28
seq13458 134 1e-26
seq477 125 6e-24
seq13827 98.7 8e-16
>seq13941
Length=98454
Score = 159 bits (176), Expect = 3e-34
Identities = 237/335 (71%), Gaps = 1/335 (0%)
Strand=Plus/Plus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
|| ||||||||| || | || ||||| | ||| ||||| |||||||| || |||||
Sbjct 98034 CAAGAGGTGCAAATGACCGAAGCGCGATTTTTTTACGGATTCCAGATCATGATCGAGAAC 98093
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGT 61389
|| |||||||| ||||||||| || | ||| |||||||||| ||| | | | ||
Sbjct 98094 GTGCACTCGGAAATGTACAGTCTTTTGATCAATACGTACATTCAGGACTCGATGAAGCGA 98153
Query 61390 GAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCC 61449
| | ||||| ||||| ||||||||||| ||| ||| ||| ||| |||||
Sbjct 98154 CATCATTTGTTTAATGCGATCGAGACGATTCCGTGCGTGCGTAAGAAGGCGTTGTGGGCG 98213
Query 61450 TTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509
|| |||||||| | | ||||| || || || || ||| | | || || |||| |
Sbjct 98214 CTCGATTGGATCGGGAACAAGACGGCGACGTTCGGCGAGCGAGTTGTAGCTTTCGCGGCG 98273
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
|| || || | |||||| || || || || | || |||||| |||| ||||| ||
Sbjct 98274 GTTGAAGGGATTTTTTTCTCGGGGTCTTTCGCGTCGATTTTTTGGATGAA-AAACGAGGT 98332
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGAT 61604
|| ||||| || |||| ||||||||||| |||||
Sbjct 98333 CTCATGCCTGGATTGACGTTCAGCAATGAATTGAT 98367
Score = 89.7 bits (98), Expect = 4e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
|||| || || ||| | || ||||| | || ||||| | ||||| ||| ||||| | |
Sbjct 96794 ATGAGCCGCTTTTGAAGGAAAATCCAGGCCGGTTCGTGATTTTCCCGATCCAGTATCACG 96853
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144
|| | ||| ||||||||||| || | |||||| |||||||| | || || |||||||
Sbjct 96854 ATGTGTGGAAAATGTACAAAAAAGCTGTAGCTTCGTTCTGGACTGCCGAAGAAGTCGATT 96913
Query 61145 TGTCCAAAG 61153
| |||||||
Sbjct 96914 TATCCAAAG 96922
>seq13338
Length=646138
Score = 138 bits (152), Expect = 9e-28
Identities = 257/372 (69%), Gaps = 4/372 (1%)
Strand=Plus/Minus
Query 61249 AATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGC 61308
|||| |||||||| ||| || |||||| || | |||| || |||| ||| || ||
Sbjct 454390 AATTAGTTGGAACGGTTCAGTCAAGAGGTGAAAATCACGGAAGCTCGTTTTTTTTATGGA 454331
Query 61309 TTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTAC 61368
||||| ||||| || |||||| |||| || ||||||||||| || | || |||| |||
Sbjct 454330 TTCCAAATTGCGATTGAGAATATCCATTCCGAGATGTACAGCCTTTTGATAAATACTTAC 454271
Query 61369 ATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGT 61427
||| || | | ||| ||| | |||||||| || ||||||||||| || ||
Sbjct 454270 ATCCAAGA-CACGATGAAAAGAAACTATTTGTTCAACGCGATCGAGACGATGCCATGTGT 454212
Query 61428 GAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGA 61487
| ||| ||| ||||| | | |||||| | | |||||| || || || ||
Sbjct 454211 GCGCAAGAAGGCGTTGTGGGCTCTTGACTGGATCGGAAACAAAACGGCGACGTTCGGCGA 454152
Query 61488 ACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAAT 61547
||| | | || ||||||| || || || | || || || || || || ||||
Sbjct 454151 GCGAATCATCGCTTTTGCGGCCGTAGAAGGCATCTTCTTTTCCGGTTCATTCGCGTCAAT 454092
Query 61548 CTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGAT-AT 61606
|||||| | |||||||| || || |||||||| |||| ||||| || || || || |
Sbjct 454091 ATTTTGGCTAAAGAAACGCGGTCTGATGCCCGGATTGACGTTCAGTAACGAATTAATCAG 454032
Query 61607 CACGCGACGAGG 61618
|| | |||||||
Sbjct 454031 CA-GAGACGAGG 454021
>seq13458
Length=7495
Score = 134 bits (148), Expect = 1e-26
Identities = 238/347 (69%), Gaps = 0/347 (0%)
Strand=Plus/Plus
Query 61255 TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314
|||||||| ||| || |||||| || | |||| || |||| ||| || || |||||
Sbjct 6158 TTGGAACGGTTCAGTCAAGAGGTGAAAATCACGGAAGCTCGTTTTTTTTATGGATTCCAA 6217
Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGG 61374
||||| || |||||| || | || |||||||||||| || | || |||| |||||| |
Sbjct 6218 ATTGCGATTGAGAATATCTATTCTGAGATGTACAGTCTTTTGATAAATACTTACATCCAG 6277
Query 61375 GAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGG 61434
|| | | || | | |||||||| || ||||||||||| || ||| |
Sbjct 6278 GACACGATGAAAAGAAATTATTTGTTCAACGCAATCGAGACGATGCCTTGTGTGCGCAAG 6337
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494
|| ||| ||||| | | ||||||| | | |||||| |||||||| || ||| |
Sbjct 6338 AAGGCGTTGTGGGCTCTTGACTGGATCAGAAACAAAACGGCGACATTTGGCGAGCGAATC 6397
Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554
| || || |||| || || || | || || | || || || | || ||||||
Sbjct 6398 ATCGCTTTCGCGGCCGTAGAAGGCATCTTCTTTTCCGCTTCATTCGCGTCGATATTTTGG 6457
Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTT 61601
| |||||||| || || |||||||| |||| ||||| || || ||
Sbjct 6458 CTAAAGAAACGCGGTCTGATGCCCGGATTGACGTTCAGTAACGAATT 6504
Score = 120 bits (132), Expect = 2e-22
Identities = 247/365 (68%), Gaps = 2/365 (1%)
Strand=Plus/Plus
Query 61255 TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314
|||||||| ||| || |||||| || | |||| || |||| ||| || || |||||
Sbjct 2547 TTGGAACGGTTCAGTCAAGAGGTGAAAATCACGGAAGCTCGTTTTTTTTATGGATTCCAA 2606
Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGG 61374
||||| || |||||| || | || ||||||||||| || | || |||| |||||| |
Sbjct 2607 ATTGCGATTGAGAATATCTATTCTGAGATGTACAGCCTTTTGATAAATACTTACATCCAG 2666
Query 61375 GAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGG 61434
|| | | || | | |||||||| || ||||||||||| || ||| |
Sbjct 2667 GACACGATGAAAAGAAATTATTTGTTCAACGCGATCGAGACGATGCCTTGTGTGCGCACG 2726
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494
|| ||| ||||| | | |||||| | | |||||| ||||| || || ||| |
Sbjct 2727 AAGGCGTTGTGGGCTCTTGACTGGATCGGAAACAAAACGGCGACATTCGGCGAGCGAATC 2786
Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554
| || | |||| || || || | || || | || || || | || ||||||
Sbjct 2787 ATCGCTTACGCGGCCGTAGAAGGCATCTTCTTTTCCGCTTCATTCGCGTCGATATTTTGG 2846
Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGAT-ATCACGCGA 61613
| |||||||| || || |||||||| |||| ||||| || || || || | || | ||
Sbjct 2847 CTAAAGAAACGCGGTCTGATGCCCGGATTGACGTTCAGTAACGAATTAATCAGCA-GAGA 2905
Query 61614 CGAGG 61618
|||||
Sbjct 2906 CGAGG 2910
>seq477
Length=28440
Score = 125 bits (138), Expect = 6e-24
Identities = 249/365 (68%), Gaps = 3/365 (1%)
Strand=Plus/Minus
Query 61255 TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314
|||||||| ||| || |||||| || | |||| || |||| ||| || || |||||
Sbjct 7545 TTGGAACGGTTCAGTCAAGAGGTGAAAATCACGGAAGCTCGTTTTTT-TATGGATTCCAA 7487
Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGG 61374
||||| || |||||| || | || ||||||||||| || | || |||| |||||| |
Sbjct 7486 ATTGCGATTGAGAATATCTATTCTGAGATGTACAGCCTTTTGATAAATACTTACATCCAG 7427
Query 61375 GAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGG 61434
|| | | || | | |||||||| || ||||||||||| || ||| |
Sbjct 7426 GACACGATGAAAAGAAATTATTTGTTCAACGCGATCGAGACGATGCCTTGTGTGCGCAAG 7367
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494
|| ||| ||||| | | |||||| | | |||||| ||||| || |||||| |
Sbjct 7366 AAGGCGTTGTGGGCTCTTGACTGGATCGGAAACAAAACGGCGACATTCGGCGAACGAATC 7307
Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554
| || || |||| || || || | || || | || || || | || ||||||
Sbjct 7306 ATCGCTTTCGCGGCCGTAGAAGGCATCTTCTTTTCCGCTTCATTCGCGTCGATATTTTGG 7247
Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGAT-ATCACGCGA 61613
| |||||||| || || |||||||| |||| ||||| || || || || | || | ||
Sbjct 7246 CTAAAGAAACGCGGTCTGATGCCCGGATTGACGTTCAGTAACGAATTAATCAGCA-GAGA 7188
Query 61614 CGAGG 61618
|||||
Sbjct 7187 CGAGG 7183
>seq13827
Length=723868
Score = 98.7 bits (108), Expect = 8e-16
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 66033 CTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGG 66092
||| ||| || |||| | ||||||| |||||||||||||| ||||||||| || |
Sbjct 454842 CTACCTCTTCGGGAGAACTGTACTCGATAATTTCGGTGCACAAATTACTGCATTTGATCG 454783
Query 66093 TGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAG 66152
| || ||||| | || ||||| || ||||||| || ||||||||| ||| |||||| |
Sbjct 454782 TTCCTAAATTTTTCTGGTTACTTTTTCGATTGCTCGCGTCCTTGTACGTCAAGTACGGTG 454723
Query 66153 TGCCGGTCTCAACTTGGGACTC 66174
| || || || || || || ||
Sbjct 454722 TACCTGTTTCCACCTGAGATTC 454701
Score = 98.7 bits (108), Expect = 8e-16
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 65414 AAGTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGAC 65473
|||||| |||||| | |||||| ||||| || || || ||||| |||||||||| |
Sbjct 455721 AAGTGATGATTGACCATTTGGAATTCGCCCGAAAGAACCCGACGAGTATAGATGTTGCTC 455662
Query 65474 GTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATG 65533
||| | ||| | ||||| ||||||| |||||||| || || || |||||||||||
Sbjct 455661 GTGTACGCTTCGATCGATTCGTTGTTGCCAAGAATTTGCGCGGTTGACGCAGTTGGCATC 455602
Query 65534 GGAGCGA 65540
|||||||
Sbjct 455601 GGAGCGA 455595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397496584238960
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