Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 205 2e-50 SEQ14764 203 6e-50 >SEQ17146 Length=6450 Score = 205 bits (226), Expect = 2e-50 Identities = 249/332 (75%), Gaps = 8/332 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| ||||||||||| ||||||||| Sbjct 3202 CCCGATAAGGGGAGTGAAAGAGACC-TGAAACCGGACGCCTACAAGCAGTCGGAGCCTCT 3144 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 3143 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 3086 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTT 182 ||||| || ||| ||| || || ||||||||| || || |||||||| ||||| Sbjct 3085 CTTAAGCCGTT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGACTGAGTT 3030 Query 183 GGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 | |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| Sbjct 3029 GCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACA 2970 Query 243 CGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 || |||||| ||||||| |||||||| | |||||| | || |||||| Sbjct 2969 CGCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGG 2910 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||| ||| |||||| || Sbjct 2909 TGAAAGGCCAATCAAACTCGGAGATAGCTGGT 2878 >SEQ14764 Length=5928 Score = 203 bits (224), Expect = 6e-50 Identities = 240/324 (74%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||||| || |||||| | | || | Sbjct 2695 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAGCAGTGGGAGCCAACTTGTTTG 2636 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| | ||| ||| ||||||| Sbjct 2635 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCAGTAGCAAGGTTAACC 2577 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || ||||| || |||| |||| ||||| |||||| ||||| ||| Sbjct 2576 GTATAGGGG-----AGCCGTAGAGAAATCGAGTCTTAATAGGGCGTTTAGTTGCTGGGTA 2522 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| ||||||||||||| |||||| | ||| Sbjct 2521 TAGACCCGAAACCGGGTGATCTATCCATGAGCAGGTTGAAGGTTGGGTAACACTAACTGG 2462 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| |||||||||| |||||||| | || |||||||||||||| Sbjct 2461 AGGACCGAACCCACTGTCGTTGAAAAGCCAGGGGATGACTTGTGGATAGGGGTGAAAGGC 2402 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 ||||||||| || |||||| || Sbjct 2401 TAATCAAACTCGGTGATAGCTGGT 2378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972555418624