Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value SEQ10664 379 4e-103 seq5770 379 4e-103 >SEQ10664 Length=18453 Score = 379 bits (420), Expect = 4e-103 Identities = 271/307 (88%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 ||| |||||||||||||| | || || || | ||||| | || || ||||||| Sbjct 683 CCGAGCCTTTCCTTCTGGCTAACCTTTCACCTTT---TTGGTGT-CTGGCGAACCAGGAC 738 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 739 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 798 Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 799 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 858 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct 859 AATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 918 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 919 GAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 977 Query 312 TTAGGGG 318 ||||||| Sbjct 978 TTAGGGG 984 Score = 379 bits (420), Expect = 4e-103 Identities = 271/307 (88%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 ||| |||||||||||||| | || || || | ||||| | || || ||||||| Sbjct 9024 CCGAGCCTTTCCTTCTGGCTAACCTTTCACCTTT---TTGGTGT-CTGGCGAACCAGGAC 9079 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 9080 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 9139 Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 9140 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 9199 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct 9200 AATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 9259 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 9260 GAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 9318 Query 312 TTAGGGG 318 ||||||| Sbjct 9319 TTAGGGG 9325 >seq5770 Length=6364 Score = 379 bits (420), Expect = 4e-103 Identities = 271/307 (88%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 ||| |||||||||||||| | || || || | ||||| | || || ||||||| Sbjct 3064 CCGAGCCTTTCCTTCTGGCTAACCTTTCACCTTT---TTGGTGT-CTGGCGAACCAGGAC 3119 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 3120 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCATGG 3179 Query 133 AATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 3180 AATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 3239 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct 3240 AATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACT 3299 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 3300 GAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 3358 Query 312 TTAGGGG 318 ||||||| Sbjct 3359 TTAGGGG 3365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914969900416