Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5770 666 0.0 SEQ10664 630 3e-178 seq4137 91.5 6e-16 >seq5770 Length=6364 Score = 666 bits (738), Expect = 0.0 Identities = 548/656 (84%), Gaps = 21/656 (3%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||||| Sbjct 5048 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAG 5107 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 5108 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 5167 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| ||||||||||||||||||||||| | | | |||||| Sbjct 5168 TTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGTATTTGATCAGACT 5227 Query 214 TGCCCGCAGTTGCTCAAC-CGGCCCCTCG--GCCGGTGCACT--CTTCTGCGGTCAGGCC 268 ||||| ||| | | ||| | | ||||| || ||| | | |||| Sbjct 5228 GATATTCAGTT----AACACTGTTCCTTGTGGATGGTGCTCTAGCTTTTTA--TTGGGCC 5281 Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTT 328 |||||||| | || || |||||| | | ||| ||||| | ||||| | |||| Sbjct 5282 AGCATCAGTTTAGGTGGCAGGATAA-GAACTGTTGAACGTGGCTC--TTCGGAG--TGTT 5336 Query 329 ATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG-CTCCGGCTAGGATGCT 387 ||||| | || || | ||| || |||||||||| ||| || | |||||||||| Sbjct 5337 ATAGCTTCAGTTG--ATACTGCCTATCTAGACTGAGGTCTGCGGCTTTGCCTAGGATGCT 5394 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 ||||||||||| | | |||||||||| |||| ||||||||||||||||| ||||||| Sbjct 5395 GGCGTAATGGTCTAATACCGCCCGTCTTGAAACATGGACCAAGGAGTCTAACGTCTATGC 5454 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA 507 |||||||||||||| |||||||| ||||||||||||||||||| ||||| | || | | Sbjct 5455 GAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGAGGGCC--TTA 5512 Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5513 GGGTGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 5572 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5573 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 5632 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 5633 AGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 5688 >SEQ10664 Length=18453 Score = 630 bits (698), Expect = 3e-178 Identities = 542/662 (82%), Gaps = 24/662 (4%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||||||||||||||||||||||||| || |||| |||||||| | ||||||| Sbjct 2711 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAG 2770 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 2771 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 2830 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 2831 TTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 2890 Query 214 TGCCCGCAGTTGCTCAACCGGC----CCCTCGG---CCGGTGCACTCT-----TCTGCGG 261 || | || | || || | |||| | |||| |||| | | Sbjct 2891 TG---GTGTTTTTTTAATGTGCAAGTCTCTCGTGGACATGTGC-CTCTGGAAATTAACAC 2946 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 | ||||| |||||| || ||||| ||||||| | |||||| || ||| || Sbjct 2947 TG-GGCCAACATCAGTTCTGGCGGCAGGATAAAT-CATTAAGAATGTAGCTACCTC--GG 3002 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381 |||||||||| |||||| | ||| || ||| ||||| | ||||| |||| || Sbjct 3003 TAGTGTTATAGCTTTT--TGGAATACTGCCAGCTGGGATTGAGGACTGCGCTTCGGCAAG 3060 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 |||| |||| |||||||| | || |||||||||| |||||||||||||||||||||| | Sbjct 3061 GATGTTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 3120 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501 |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| || | Sbjct 3121 CTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGGC 3180 Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 | | |||||||| ||||||||| | |||||| ||||||| | |||||||||||||||| Sbjct 3181 C--TTCGGGTGCACAATCGACCGACCTTGATGTTTTCGGATAGGTTTGAGTAAGAGCATA 3238 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3239 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 3298 Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 3299 TGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGC 3358 Query 682 GA 683 || Sbjct 3359 GA 3360 Score = 630 bits (698), Expect = 3e-178 Identities = 542/662 (82%), Gaps = 24/662 (4%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||||||||||||||||||||||||| || |||| |||||||| | ||||||| Sbjct 11052 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAG 11111 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 11112 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 11171 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 11172 TTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 11231 Query 214 TGCCCGCAGTTGCTCAACCGGC----CCCTCGG---CCGGTGCACTCT-----TCTGCGG 261 || | || | || || | |||| | |||| |||| | | Sbjct 11232 TG---GTGTTTTTTTAATGTGCAAGTCTCTCGTGGACATGTGC-CTCTGGAAATTAACAC 11287 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 | ||||| |||||| || ||||| ||||||| | |||||| || ||| || Sbjct 11288 TG-GGCCAACATCAGTTCTGGCGGCAGGATAAAT-CATTAAGAATGTAGCTACCTC--GG 11343 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381 |||||||||| |||||| | ||| || ||| ||||| | ||||| |||| || Sbjct 11344 TAGTGTTATAGCTTTT--TGGAATACTGCCAGCTGGGATTGAGGACTGCGCTTCGGCAAG 11401 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 |||| |||| |||||||| | || |||||||||| |||||||||||||||||||||| | Sbjct 11402 GATGTTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 11461 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501 |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| || | Sbjct 11462 CTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGGC 11521 Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 | | |||||||| ||||||||| | |||||| ||||||| | |||||||||||||||| Sbjct 11522 C--TTCGGGTGCACAATCGACCGACCTTGATGTTTTCGGATAGGTTTGAGTAAGAGCATA 11579 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11580 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 11639 Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 11640 TGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGC 11699 Query 682 GA 683 || Sbjct 11700 GA 11701 >seq4137 Length=20986 Score = 91.5 bits (100), Expect = 6e-16 Identities = 119/158 (75%), Gaps = 5/158 (3%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| |||| |||||| | | |||||| |||||| Sbjct 7713 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 7772 Query 100 ATTGGCCAGAGACCGAT-AGCGCACAAGTAGAGTGATCGAAAGATGA-AAAGCACTTTGG 157 || | ||||||||| ||| ||||||| |||| ||||| | |||| ||| || Sbjct 7773 ATAACCATGAGACCGATTAGCAAACAAGTACCGTGAG-GAAAGTTTTGAAAGGACTCTGA 7831 Query 158 AAAGAGAGTTAAAA-AGCACG-TGAAATTGTTGAAAGG 193 | |||||||||||| || ||| ||||| || | | ||| Sbjct 7832 ATAGAGAGTTAAAATAGTACGTTGAAACTGCTTAGAGG 7869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079460704100