Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 107 2e-21 SEQ14764 93.3 4e-17 >SEQ17146 Length=6450 Score = 107 bits (118), Expect = 2e-21 Identities = 134/179 (75%), Gaps = 5/179 (3%) Strand=Plus/Minus Query 7 CGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGG 66 |||||||||||| ||| || ||||||| |||||||||| || |||||||||||| | || Sbjct 3647 CGGTGGATGCCTTGGCACTAAGAGGCGATGAAGGACGTGGTACGCTGCGAAAAGCCATGG 3588 Query 67 GGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126 ||| || | | | ||||||||| ||| ||||||||||||||||| | | | Sbjct 3587 GGAGCCGCGAACAGGCTTTGATCCGTGGATGTCCGAATGGGGCAACCCCCTCGCAAGAGG 3528 Query 127 AT-ATAT-CATAACGC-TAG--GCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || || | | || | ||| || | |||| ||| ||||||||||||||||| |||| Sbjct 3527 ATCATGTACTGAATACATAGGTGCATGAGGCAAACCCGGGGAACTGAAACATCTCAGTA 3469 >SEQ14764 Length=5928 Score = 93.3 bits (102), Expect = 4e-17 Identities = 133/185 (72%), Gaps = 12/185 (6%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || ||||||| ||| ||||| ||| |||||| ||||| |||| Sbjct 3156 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCTGCGATAAGCTTCGGG 3097 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGAT----ATATT 122 || |||| ||| ||||||| |||| || |||||||| ||||| | ||| Sbjct 3096 GAGGCGGCAAATATCCTGTGATCCGGAGATTTCTGAATGGGGAAACCCACTTACCATAAG 3037 Query 123 GGAGATATATCATAACG-----CTAGGC--GTTAGGCGAACGTGGGGAACTGAAACATCT 175 | || ||| ||| | | ||| | | ||||||||| |||||| |||||||||| Sbjct 3036 GTAGGTATCGCATGATGAATACATAGTCATGCGAGGCGAACGAGGGGAAGTGAAACATCT 2977 Query 176 AAGTA 180 |||| Sbjct 2976 CAGTA 2972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476683869102