Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 426 4e-117 SEQ17146 385 1e-104 >SEQ14764 Length=5928 Score = 426 bits (472), Expect = 4e-117 Identities = 336/401 (84%), Gaps = 1/401 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| Sbjct 4842 AGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTT 4783 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||| ||||||||||||||||||||| |||||| | | |||| | | |||||||||| Sbjct 4782 AATCGGATTTACTGGGCGTAAAGCGTGCGTAGGCGGCTTTTTAAGTCGGATGTGAAATCC 4723 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 ||| ||||||| ||||||||||||| | |||| ||||||| || ||||| ||| Sbjct 4722 CCGAGCTTAACTTGGGAATTGCATTCGATACTGGGAAGCTAGAGTATGGGAGAGGATGGT 4663 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| ||||||| |||||||||||||| || |||||||| ||| ||||||||||| Sbjct 4662 AGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGATGGCGAAGGC 4603 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 |||| |||| ||| ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 4602 AGCCATCTGGCCTAATACTGACGCTGAGGTACGAAAGCATGGGGAGCAAACAGGATTAGA 4543 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGG-ATTTACTTCCTTG 368 ||||||||||||||| ||| |||||||| || ||||| ||||||| ||| | || Sbjct 4542 TACCCTGGTAGTCCATGCCGTAAACGATGTCTACTAGCCGTTGGGGTCTTTGAGACTTTA 4483 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || |||||||||| |||| ||||||||||||| ||| Sbjct 4482 GTGGCGCAGCTAACGCGATAAGTAGACCGCCTGGGGAGTAC 4442 >SEQ17146 Length=6450 Score = 385 bits (426), Expect = 1e-104 Identities = 333/409 (81%), Gaps = 3/409 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | |||| |||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 5377 TACCCGTAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGC 5318 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||| ||||||| ||||||||||||| | ||| ||||||||| || ||| ||| Sbjct 5317 TAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTAGGCGGTTGATGCAGTCAGATGT 5258 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCAC-GACTAGAGTGTGTCAG 181 ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| | || Sbjct 5257 GAAATCCCCGGGCTTAACCTGGGAACTGCATTTGAGAC-GCATTGACTAGAGTTCGAGAG 5199 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 |||| |||||||||| |||||| ||||||| ||||||||| ||| ||||||| || Sbjct 5198 AGGGTTGTGGAATTCCCAGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCGGTG 5139 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| || ||||| | ||||||||| | || ||||||||||||||||||||| Sbjct 5138 GCGAAGGCGGCAACCTGGCTCGATACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACA 5079 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTTA 360 |||||||||||||||||||||||||| |||||||| | || | ||||||| | ||| Sbjct 5078 GGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGTGTGCTGGATGTTGGGTAACTTA 5019 Query 361 CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || || |||||||||| ||| |||||||||||| ||| Sbjct 5018 GTTACTCAGTGTCGAAGCTAACGCGCTAAGCACACCGCCTGGGGAGTAC 4970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289275768768