Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 149 9e-34 SEQ17146 141 1e-31 >SEQ14764 Length=5928 Score = 149 bits (164), Expect = 9e-34 Identities = 186/252 (74%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| |||||||||||| ||| || ||||| || |||| | || || ||| Sbjct 1338 TTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 1396 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | || |||||||| |||||||| || || | |||| | | ||| ||||||| Sbjct 1397 GTGCTATGTTTTTAATAAACAGTTGCAGGGGCCTGGTTTCTGTGGCTGCCAATAGCTCAA 1456 Query 122 ----CACGTCGT-TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 || ||| | ||||| ||| || ||||||||||||||||||| ||||||||| Sbjct 1457 GGAGCAAGTCCTATCACCGTCAGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGC 1516 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 | | |||||| | || ||||| | | | ||| || || | ||| |||||||||||||||| Sbjct 1517 CTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCTTTGGTCTACTCGACCTGACCACCTGTGT 1576 Query 237 CGGTTTACGGTA 248 |||||| |||| Sbjct 1577 CGGTTTCGGGTA 1588 >SEQ17146 Length=6450 Score = 141 bits (156), Expect = 1e-31 Identities = 183/249 (73%), Gaps = 13/249 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| || || || | |||||| Sbjct 1952 CTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCATCTCACGAT-TTCGCAG 2010 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| || ||||| | || Sbjct 2011 AGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTG------CCACCCG-TC- 2062 Query 121 ACACGTCGTTCACCAGCAGTGGCAC-CCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| || || | | || |||||||||||| | || |||||| | Sbjct 2063 ---CATGGTTGCCCACGAGCGGGTCTCGTTTATCCCGAAGTTACACGAGCAATTTGCCTA 2119 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 2120 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 2179 Query 240 TTTACGGTA 248 ||| |||| Sbjct 2180 TTTCGGGTA 2188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694230869766