Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 560 3e-157 SEQ17146 318 1e-84 >SEQ14764 Length=5928 Score = 560 bits (620), Expect = 3e-157 Identities = 381/427 (89%), Gaps = 1/427 (0%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||| |||||||||| |||||||| ||||||||||| ||| | |||||||||| Sbjct 1144 CGCGGGTACACCGCATCTTCACGGCGATTTCGATTTCACTGAGCCTCTGCTGGAGACAGC 1203 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1204 GCCCCCATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1263 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct 1264 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC 1323 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 1324 GCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTT 1383 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 |||||||||||||||||| ||||||||||||||||| |||| |||||||| ||| | | Sbjct 1384 TCGTGTTTGCAGAGTGCTATGTTTTTAATAAACAGTTGCAGGGGCCTGGTTTCTGTGGCT 1443 Query 301 GGCATGAGCTTACGGAGCAAGTCCT-TCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 | || |||| | |||||||||||| ||||| ||| | ||| |||||||||||||||||| Sbjct 1444 GCCAATAGCTCAAGGAGCAAGTCCTATCACCGTCAGCAGCGTACCTTCTCCCGAAGTTAC 1503 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||| || ||||||||||||||||| | |||||||||||||||| ||||| | ||| ||| Sbjct 1504 GGTACCATTTTGCCTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCTTTGGTCTACTCGACC 1563 Query 420 CAACCAC 426 ||||| Sbjct 1564 TGACCAC 1570 >SEQ17146 Length=6450 Score = 318 bits (352), Expect = 1e-84 Identities = 325/423 (77%), Gaps = 31/423 (7%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||||||| | || ||||||||| ||||||| | ||||||||| Sbjct 1768 CGCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGTCGATGCTGGAGACAGT 1827 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1828 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1887 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||||||||||||||||| || || |||| Sbjct 1888 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAGTGCTT------- 1940 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 || ||| | || |||||||||||||||||||||||||||| ||||||||||| || Sbjct 1941 GCACACCTCCTC--TTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCATCTC 1998 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || || |||||| ||||||||||| ||||||||||| | |||||| | | | ||| Sbjct 1999 ACGATTTCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTGCCACC 2058 Query 301 GG--CATG--AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356 | |||| || || |||| ||| || || ||||||||| Sbjct 2059 CGTCCATGGTTGCCCAC-GAGCGGGTC--TC---------------GTTTATCCCGAAGT 2100 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 ||| | |||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 2101 TACACGAGCAATTTGCCTAGTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCT 2160 Query 417 ACC 419 ||| Sbjct 2161 ACC 2163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260483009664