Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 291 2e-76 SEQ14764 259 1e-66 >SEQ17146 Length=6450 Score = 291 bits (322), Expect = 2e-76 Identities = 229/274 (84%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||||||| |||| | ||||||| | ||||| || | ||||||||| || Sbjct 1774 TACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGTCGATGCTGGAGACAGTGGGGAA 1833 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1834 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1893 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | |||| ||| |||| || Sbjct 1894 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAGTGC-----TTGC----AC 1944 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | ||| ||||||||||| |||||||||||||||||| ||||||| || ||| ||| | Sbjct 1945 ACCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCATCTCACGATT 2004 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | ||||| ||||||||||| |||||||||||| Sbjct 2005 TCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCT 2038 >SEQ14764 Length=5928 Score = 259 bits (286), Expect = 1e-66 Identities = 233/293 (80%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | |||| | ||||||| ||| || | | ||||||| |||| Sbjct 1150 TACACCGCATCTTCACGGCGATTTCGATTTCACTGAGCCTCTGCTGGAGACAGCGCCCCC 1209 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||| ||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1210 ATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1269 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||||||||||| | | |||||| || | ||||| Sbjct 1270 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTACGCTAAC 1329 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | |||||||||||||||||||||||| ||| ||||||| || ||| || | Sbjct 1330 CCCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTCGTGT 1389 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC 293 | ||||| || ||||||| |||||||| || |||||| | |||| ||| Sbjct 1390 TTGCAGAGTGCTATGTTTTTAATAAACAGTTGCAGGGGCCTGGTTTCTGTGGC 1442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062132891392