Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value SEQ10664 464 1e-128 SEQ22414 279 9e-73 SEQ14043 86.0 1e-14 SEQ18992 78.8 2e-12 SEQ14764 73.4 7e-11 >SEQ10664 Length=18453 Score = 464 bits (514), Expect = 1e-128 Identities = 280/295 (95%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| | || |||||||||||||||||||||||||||||| Sbjct 5463 TACTAAGTTCAATTACTATTGCGATAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 5404 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5403 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 5344 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 5343 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 5284 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5283 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 5224 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5223 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 5169 Score = 455 bits (504), Expect = 6e-126 Identities = 278/295 (94%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| | || |||||||||||||||||||||||||||||| Sbjct 13804 TACTAAGTTCAATTACTATTGCGATAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 13745 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13744 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 13685 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 13684 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 13625 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13624 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 13565 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 13564 CAAATTCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 13510 >SEQ22414 Length=6812 Score = 279 bits (308), Expect = 9e-73 Identities = 209/243 (86%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 5287 GTCAT-AGTAGGGATAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 5229 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | ||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 5228 -TGAATGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 5170 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||| ||||||||||| |||||||||||||| |||||| ||||||||||||||||| Sbjct 5169 ACATCGAAAGATCAAAAAGCGACGTCGCTATGAACTCTTGGCCGCCACAAGCCAGTTATC 5110 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 ||| |||||||||||||| ||||||| | ||| | | | ||||||||||||| Sbjct 5109 CCTATGGTAACTTTTCTGACACCTCTTGTTAAAAACTCCTTAAACCAAAAGGATCGATAG 5050 Query 270 GCC 272 ||| Sbjct 5049 GCC 5047 >SEQ14043 Length=15735 Score = 86.0 bits (94), Expect = 1e-14 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG-TTCCCTAT 91 ||||||||| ||||||||||||||||| ||||||||||| |||| ||| | |||| || Sbjct 7691 ATCAGTAGGATAAAACTAACCTGTCTCCCGACGGTCTAAATCCAGTTCAGGCTTCCTGAT 7750 Query 92 TAGTGGGTGAACAATCCAACGCTT 115 || |||||| |||||||| ||| Sbjct 7751 TAACAGGTGAATAATCCAACACTT 7774 >SEQ18992 Length=137876 Score = 78.8 bits (86), Expect = 2e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||| | |||| |||||||||||||||||| |||| ||||||||||||||| ||||||| Sbjct 111094 CATTAATAGGATAAAACTAACCTGTCTCACGACGTTCTAAACCCAGCTCAAGTTCCCT 111151 >SEQ14764 Length=5928 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| || ||||| | || Sbjct 589 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCTCTTTAAATGGCGAACAGCCATACC 648 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| ||| || | | |||| || ||||||||||||| | |||| | | Sbjct 649 CTTGGGACCTGCTTCAGCCCCAGGATGA---GATGAGCCGACATCGAGGTGCCAAACACC 705 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||| ||||| | | |||| |||||||| ||| ||||| Sbjct 706 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCAGAGTACCTTTT 760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854185186752