Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 221 2e-55 SEQ17146 143 5e-32 >SEQ14764 Length=5928 Score = 221 bits (244), Expect = 2e-55 Identities = 240/312 (77%), Gaps = 5/312 (2%) Strand=Plus/Minus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAAC- 88 |||||||| | |||||| ||| |||| |||| || ||||| ||||||| Sbjct 1050 ACGCCAGTTGCTATGGAGCCATCCTTGAAATACCACCCTGGTAATATTGAGGTTCTAACT 991 Query 89 CGGACGACGTATAACCGTTGACG-GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTC 147 | | | ||| || ||| |||| |||| |||| | ||| |||||||||||||||||| Sbjct 990 CTGTCC-CGT-TATCCGG-GACGAGGACCATGTCTGGTGGGTAGTTTGACTGGGGCGGTC 934 Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 ||||| ||||||||||||||| | | ||| | | |||||| ||| ||||| || ||| Sbjct 933 TCCTCCTAAAGAGTAACGGAGGAGTACGAAGGTGCGCTCAGCGTGGTCGGAAATCACGCG 874 Query 208 CACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267 | ||| ||||||||||| | | || ||||||| |||| |||||| |||||| |||||| Sbjct 873 TAGAGTATAAAGGCAAAAGCGCGCTTAACTGCGAGACCCACAAGTCGAGCAGGTACGAAA 814 Query 268 GTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCT 327 || || |||| |||||||| ||| ||| |||||| |||| |||||| ||||||||||| | Sbjct 813 GTAGGTCTTAGTGATCCGGTGGTTCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGT 754 Query 328 ACCCTGGGGATA 339 || ||||||||| Sbjct 753 ACTCTGGGGATA 742 >SEQ17146 Length=6450 Score = 143 bits (158), Expect = 5e-32 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||||||||||||||||||||||||||||||||| ||||||||||||| | | | | || Sbjct 1579 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGGCGCGCGATGGTGGGCT 1520 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 ||| || ||||||| | ||||||| |||| ||| | |||||| || | Sbjct 1519 CAGGCCGGTCGGAAACCGGCTGTCGAGTGCAATGGCATAAGCCCGCCTGACTGTGAGAGT 1460 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 || || | ||| |||||||||||| | || |||||||| ||| | |||| ||| Sbjct 1459 GACAGCTCGATCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGTCCCACGTGGACGGGC 1400 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| ||||||||||| ||| || |||||| Sbjct 1399 CATCGCTCAACGGATAAAAGGTACTCTAGGGATA 1366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982153004992