Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 444 2e-122 SEQ14764 365 2e-98 >SEQ17146 Length=6450 Score = 444 bits (492), Expect = 2e-122 Identities = 458/592 (77%), Gaps = 18/592 (3%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| | ||| |||| | ||| | |||| | |||| ||| | ||| | || ||||| Sbjct 2716 TCGACAATGGACCTTAG-CACCCACTGTCTGTCTGCCGGGCTAT-ACTCCTGGGTATTCG 2773 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCC-TAGACCATCCAGTGCTCTACCTCC 119 |||||||||| || |||||| | ||||||||| ||| ||||||||||||||||| || Sbjct 2774 GAGTTTGGTTAGGTTTGGTAAGGCTTTGGGCCCCCCTAGCCCATCCAGTGCTCTACCCCC 2833 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 | |||||| ||||| | |||| ||| |||||| ||||||||||||||| | || Sbjct 2834 CAGGGTAAACACCCGACGATCTACCTCAATAGATTTCGCGGAGAACCAGCTATCTCCGAG 2893 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| |||||| |||||||| |||||||| |||||| Sbjct 2894 TTTGATTGGCCTTTCACCCCTAGCCACAGCTCATCCCCGACTTTTTCAACAGGCGTGGGT 2953 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||| |||||| || ||||| ||||| |||| |||||| ||||||||| | || Sbjct 2954 TCGGCCCTCCAGTGCGTGTTACCGCACCTTCAGCCTGGCCATGGCTAGATCACTCGGTTT 3013 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 |||||||| | || ||||| |||||||||| ||||||||||||||||| |||| || Sbjct 3014 CGGGTCTTCTGCCAGCAACTCAGTCGCCCTATTCAGACTCGCTTTCGCTACGCCTACACC 3073 Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 |||| |||| ||||| || ||| |||||||| | | |||| | ||||||| ||||| Sbjct 3074 TAACGGCTTAAGCTCGCTGCA-AACAGAAACTCGCTGACCCATTATACAAAAGGTACGCC 3132 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 |||||| | ||| || |||||||| | |||||||| |||||||||| Sbjct 3133 GTCACC----CCATAAGAG--------GCTCCGACTGCTTGTAGGCGTCCGGTTTCAGGT 3180 Query 480 ACTATTTCACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538 || ||||||||||| ||||| |||||||||||||||||||||||||||| ||||| Sbjct 3181 -CTCTTTCACTCCCCTTATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTA 3239 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 |||||||| ||||||||||||||||| |||||||||| ||| |||| || Sbjct 3240 TCGGTCACTAAGGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGAC 3291 >SEQ14764 Length=5928 Score = 365 bits (404), Expect = 2e-98 Identities = 448/601 (75%), Gaps = 22/601 (4%) Strand=Plus/Plus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||||||||| ||| | |||||||||| | ||| | | ||| || ||||||| Sbjct 2218 GACTACGGACGTTAG-CACCCGCAGTCTGTCTCCCG-GATAGTACTCATAGGTATTCGGA 2275 Query 63 GTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCGG 121 ||||| | || |||||| | | | |||||||| | | |||||||||||| || Sbjct 2276 GTTTGCATCGGTTTGGTAAGTCGGGATGACCCCCTAGCCGAAACAGTGCTCTACCCCCT- 2334 Query 122 GAAGAAACACG--CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 | | | || ||| || |||||||| ||||||||||||||||||||||| || Sbjct 2335 -ATGGTATTCGTCCGAGGCGCTACCTAAATAGCTTTCGGGGAGAACCAGCTATCACCGAG 2393 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 ||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||| Sbjct 2394 TTTGATTAGCCTTTCACCCCTATCCACAAGTCATCCCCTGGCTTTTCAACGACAGTGGGT 2453 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 ||||||||||| || |||||| ||||||||||| |||||||||||||| | || Sbjct 2454 TCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCTCATGGATAGATCACCCGGTTT 2513 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 ||||||| | | || ||| | |||||||||| |||||| |||| |||||||| ||| Sbjct 2514 CGGGTCTATACCCAGCAACT-AAACGCCCTATTAAGACTCGATTTCTCTACGGCTCCCCT 2572 Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 | || ||||||||| || || || || |||| | | |||| | ||||||| |||| Sbjct 2573 ATAC-GGTTAACCTTGCTACTGAA-TATAAGTCGCTGACCCATTATACAAAAGGTACGCA 2630 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 |||||| ||| || | ||||| || | ||||| ||| ||||||||| Sbjct 2631 GTCACC--------AAA---CAAGTTGGCTCCCACTGCTTGTATGCATGCGGTTTCAGGA 2679 Query 480 ACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538 |||||||||||||| | ||||||| |||||| |||||||||||||||||| || | ||| Sbjct 2680 TCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTA 2739 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 ||||||| |||||||||||| ||| || ||||||| ||| ||||| || | |||| Sbjct 2740 TCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAGGTTTC 2799 Query 599 A 599 | Sbjct 2800 A 2800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817143019008