Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 224 2e-56 SEQ17146 187 5e-45 >SEQ14764 Length=5928 Score = 224 bits (248), Expect = 2e-56 Identities = 239/313 (76%), Gaps = 17/313 (5%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 4935 GGCATGGCTGGATCAGGGTTCCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 4994 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| ||| Sbjct 4995 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCGGATCATCCTCTCAGACCCGCTACAGAT 5054 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| ||| | ||||||||| |||||| | | || ||||| | | Sbjct 5055 CGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCCGACTTAGGCTCATCTATTA 5114 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCC--TCTGACAT------TATGCGGTAT 232 ||| | ||||| | | |||| || | | ||| | | |||||||||| Sbjct 5115 GCGCAA-------GGTCACA-AGTGATCCCCTGCTTTCTCCCGTAGGACGTATGCGGTAT 5166 Query 233 TAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCAC 292 |||| | | |||| | | ||| | || | | | |||||| || || | || |||||||| Sbjct 5167 TAGCATCCCTTTCGAGATGTTGTCCCCCATTAATAGGCAGATTCCT-AAGTATTACTCAC 5225 Query 293 CCGTCCGCCACTA 305 ||||||||| ||| Sbjct 5226 CCGTCCGCCGCTA 5238 >SEQ17146 Length=6450 Score = 187 bits (206), Expect = 5e-45 Identities = 138/161 (86%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 5437 GGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 5496 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| |||| Sbjct 5497 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTATCGAT 5556 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCG 161 | ||| |||||| ||| ||| | ||||||||| ||||||| Sbjct 5557 CATCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCG 5597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998148982272