Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value SEQ10664 150 2e-34 seq5770 150 2e-34 >SEQ10664 Length=18453 Score = 150 bits (166), Expect = 2e-34 Identities = 152/193 (79%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| Sbjct 842 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 783 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || | |||||||||||||||||||||||| |||| ||||||||||||||| | || Sbjct 782 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCAG 724 Query 125 ACACCAATGAAGGCATACGGGCTCACCAAGAGGTAGGGCTGGGT--AATGCAGTACTCGC 182 ||||||| || | | || | ||| ||| | |||| ||| | |||||||||| Sbjct 723 ACACCAA--AAAGGTGAAAGGTTAGCCAGAAGGAAAGGCTCGGTTGGGTCCAGTACTCGC 666 Query 183 CGTGAGGCGGACC 195 | | | ||||||| Sbjct 665 CATAAAGCGGACC 653 Score = 150 bits (166), Expect = 2e-34 Identities = 152/193 (79%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| Sbjct 9183 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 9124 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || | |||||||||||||||||||||||| |||| ||||||||||||||| | || Sbjct 9123 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCAG 9065 Query 125 ACACCAATGAAGGCATACGGGCTCACCAAGAGGTAGGGCTGGGT--AATGCAGTACTCGC 182 ||||||| || | | || | ||| ||| | |||| ||| | |||||||||| Sbjct 9064 ACACCAA--AAAGGTGAAAGGTTAGCCAGAAGGAAAGGCTCGGTTGGGTCCAGTACTCGC 9007 Query 183 CGTGAGGCGGACC 195 | | | ||||||| Sbjct 9006 CATAAAGCGGACC 8994 >seq5770 Length=6364 Score = 150 bits (166), Expect = 2e-34 Identities = 152/193 (79%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| Sbjct 3223 CTAGAAACCAACAAAATAGAACCATAACGTCCTATTCTATTATTCCATGCTAATATATTC 3164 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || | |||||||||||||||||||||||| |||| ||||||||||||||| | || Sbjct 3163 GAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTT-CGCCAG 3105 Query 125 ACACCAATGAAGGCATACGGGCTCACCAAGAGGTAGGGCTGGGT--AATGCAGTACTCGC 182 ||||||| || | | || | ||| ||| | |||| ||| | |||||||||| Sbjct 3104 ACACCAA--AAAGGTGAAAGGTTAGCCAGAAGGAAAGGCTCGGTTGGGTCCAGTACTCGC 3047 Query 183 CGTGAGGCGGACC 195 | | | ||||||| Sbjct 3046 CATAAAGCGGACC 3034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595055031228