Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 259 1e-66 SEQ14764 203 8e-50 >SEQ17146 Length=6450 Score = 259 bits (286), Expect = 1e-66 Identities = 309/410 (75%), Gaps = 11/410 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||| || ||| |||||||||||| ||| ||||||| | | || ||| | | Sbjct 2310 CGACTACGGCTCTCGCCCTCGCCTTAGGGGCCGGCTCACCCTGCGTGGATTAACCTTGCG 2369 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCC-GTCACACGCTACTCATGCCT 119 | |||||||||||| |||||| | | ||| | | | || ||||||||||| | Sbjct 2370 CAGGAACCCTTGGACTTTCGGCGACAGTGTTTCTCGCACTGTTTGTCGCTACTCATGTCA 2429 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGG-CAGCTTCACC-ACTGACAC 177 |||||| |||| | | ||||| | | ||||||| | | |||| | ||| || Sbjct 2430 GCATTCGCACTTCCGATATCTCCAG-AGAGGGTCACCCCGTCTCCTTCGCAGACTTACGG 2488 Query 178 GACGCTCCCCTACCCAACC-ACACAGGTTGC---CACAGCTTCGGCGGATAACTTAAGCC 233 ||||||| ||||| | ||| || ||| |||||||||||| | ||| |||| Sbjct 2489 AACGCTCCGCTACCGCGCATACAAAGTATGCACCCACAGCTTCGGCACGTGGCTTGAGCC 2548 Query 234 CCGCTACATTATCGGCGC--GGAATC-ACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 ||| |||||| ||||||| || || | | ||||||||||||||||||| ||||| || Sbjct 2549 CCGTTACATTTTCGGCGCAGGGTTTCTAATAGACCAGTGAGCTATTACGCTTTCTTTAAA 2608 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 ||||||||||||| ||||||||||||||||||| | | | | ||||||||||||||||| Sbjct 2609 GGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAATCCCCACATCCTTTCCCACT 2668 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || ||| | |||||||||||||||| || |||||||||||||||||||| Sbjct 2669 TAGCCACGATTTAGGGGCCTTAGCTGGTGGTCTGGGCTGTTTCCCTCTCG 2718 >SEQ14764 Length=5928 Score = 203 bits (224), Expect = 8e-50 Identities = 293/405 (72%), Gaps = 9/405 (2%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| |||||||||||| | || ||| | Sbjct 1814 CGACTACGCCTCTCGGCCTCGCCTTAGGGGTCGACTCACCCAGCCCCGATTAACGTTGGA 1873 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||||||| || ||| ||||| || ||||||| || |||||| | | Sbjct 1874 CTGGAACCCTTGGTCTTTCAGCGAACGGGTTTTTCACCCGTTTTGTCGTTACTCACGTCA 1933 Query 120 GCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACAC 177 |||||| |||| | || | ||||| || | || | || ||||| | || ||| Sbjct 1934 GCATTCGCACTTCTGAT-ACCTCCAGCATGCT-TCTCAACACACCTTCATCGGCTTACAG 1991 Query 178 GACGCTCCCCTACC-CAACCACACAGGTTGC---CACAGCTTCGGCGGATAACTTAAGCC 233 ||||||||||||| | ||| | | | | |||||||||| ||| || |||| Sbjct 1992 AACGCTCCCCTACCACGTATACAATGTATACATCCGCAGCTTCGGCATATAGTTTTAGCC 2051 Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293 ||| ||||| || |||| | ||| ||| ||||||||||||||| ||||| |||| Sbjct 2052 CCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCTTTAAAGGG 2111 Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 |||||||||| ||||||||||||| | |||||| || ||||||| ||||||||| | Sbjct 2112 TGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTATGCCTTCCCACATCGTTTCCCACTTAA 2171 Query 354 TCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | || ||||||||||||| | ||||| ||||| ||||| Sbjct 2172 CTATAATTTTGGGGCCTTAGCTGGCGGTCTGGATTGTTTTCCTCT 2216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177303927808