Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 224 2e-56 SEQ14764 174 3e-41 >SEQ17146 Length=6450 Score = 224 bits (248), Expect = 2e-56 Identities = 226/291 (78%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 5088 CCCACGCTTTCGCGCCTCAGCGTCAGTATCGAGCCAGGTTGCCGCCTTCGCCACCGGTGT 5147 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| |||||| | || Sbjct 5148 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACAACCCTCTCTCGAAC 5207 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || || |||||||||| |||| ||||| | ||||||||||||| Sbjct 5208 TCTAGTCAATGCGTCTCAAATGCAGTTCCCAGGTTAAGCCCGGGGATTTCACATCTGAC- 5266 Query 181 TGCCT-TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 ||| | |||||||| |||||||||| |||| | | |||| |||||| ||| ||| | Sbjct 5267 TGCATCAACCGCCTACGCGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTC 5326 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 5327 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTACGGGTA 5377 >SEQ14764 Length=5928 Score = 174 bits (192), Expect = 3e-41 Identities = 210/284 (74%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| ||||||| ||||||||||||| | |||| | |||||||||| ||| | Sbjct 4560 CCCATGCTTTCGTACCTCAGCGTCAGTATTAGGCCAGATGGCTGCCTTCGCCATCGGTAT 4619 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTC--CGATTGCCTCTCCAGC 118 |||||| || |||||||||||||||||||||| ||||||| | || ||||||| Sbjct 4620 TCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTCTACCAT--CCTCTCCCAT 4677 Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA 178 |||| || |||| || |||||| ||| ||| | | ||||||||| || Sbjct 4678 ACTCTAGCTTCCCAGTATCGAATGCAATTCCCAAGTTAAGCTCGGGGATTTCACATCCGA 4737 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 ||| |||||||| | | |||||| |||| |||||||| ||||||| || ||| Sbjct 4738 CTTAAAAAGCCGCCTACGCACGCTTTACGCCCAGTAAATCCGATTAACGCTCGCACCCTC 4797 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| |||||||| Sbjct 4798 TGTATTACCGCGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTC 4841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828598134882