Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 136 3e-30 SEQ17146 104 2e-20 >SEQ14764 Length=5928 Score = 136 bits (150), Expect = 3e-30 Identities = 115/141 (82%), Gaps = 8/141 (6%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||| Sbjct 753 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTA 812 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | |||| | ||||||| | |||| | |||||||| || ||| Sbjct 813 CTTTCGTACCTGCTCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACT-- 870 Query 121 CACTAC----GATTTCCGACC 137 |||| ||||||||||| Sbjct 871 --CTACGCGTGATTTCCGACC 889 >SEQ17146 Length=6450 Score = 104 bits (114), Expect = 2e-20 Identities = 96/120 (80%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAG--CCACCGGATCACTATGACC 58 ||||||||||||||||||||||||||| |||| | | | |||||||||||||||| || Sbjct 1377 TACCTTTTATCCGTTGAGCGATGGCCCGTCCA--CGTGGGACCACCGGATCACTATGGCC 1434 Query 59 TGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||| || || ||| ||||| || ||| || ||| |||||||||||| Sbjct 1435 GACTTTCGTCTCTGATCGAGCTGTCACTCTCACAGTCAGGCGGGCTTATGCCATTGCACT 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351917031400