Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 309 5e-82 SEQ14764 309 5e-82 >SEQ17146 Length=6450 Score = 309 bits (342), Expect = 5e-82 Identities = 233/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| |||| |||||||| ||| | Sbjct 1042 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCATACTTAGCTACCCGG 1101 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 || ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 1102 CTGTGCCACTGGCGTGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 1161 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | || ||| |||||| | |||||||||||||||||||| | Sbjct 1162 TAGGGACAAATCCTCTCAAGTCTCTTACACCCACGGCAGATAGGGACCGAACTGTCTCAC 1221 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 1222 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 1281 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 1282 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 1315 >SEQ14764 Length=5928 Score = 309 bits (342), Expect = 5e-82 Identities = 233/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| |||||| |||||||||| |||||| ||||||||||| ||| ||||| ||| | Sbjct 418 GAGGTAGGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCGAACATAGCTACCCGG 477 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||| ||||| ||| ||||||||||| ||||| | ||||||||||||| Sbjct 478 CGATGCGACTGGCGTCACAACCGGTACACCAGAGGTTCGTCCACTCTGGTCCTCTCGTAC 537 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || | ||| ||||||||||||||| ||||||||| |||||||||||||||||||| | Sbjct 538 TAGGAGCAGATCCTCTCAAATTTCCAACGCCCACGGTAGATAGGGACCGAACTGTCTCAC 597 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct 598 GACGTTCTAAACCCAGCTCGCGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACC 657 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | ||||||||||||||||||| |||||||||||| Sbjct 658 TGCTTCAGCCCCAGGATGAGATGAGCCGACATCG 691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780609825912