Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value SEQ17146 367 4e-99 SEQ14764 293 7e-77 >SEQ17146 Length=6450 Score = 367 bits (406), Expect = 4e-99 Identities = 283/335 (84%), Gaps = 1/335 (0%) Strand=Plus/Minus Query 157 ACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCC 216 ||| |||| ||||||||||||||| ||||| ||| ||||||||||| |||| |||| Sbjct 5606 ACCTGCGTTCGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCGATAGCT 5547 Query 217 GACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGG 276 | ||||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||| Sbjct 5546 GGTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGG 5487 Query 277 CAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGA 336 |||||||||||||||||| ||||||||| |||||||||| |||||| |||||||| | || Sbjct 5486 CAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGA 5427 Query 337 TGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAG 396 ||||| |||||| | ||||||| || || | ||| ||| |||||||||| | || Sbjct 5426 AGAAGGTCTTCGGATTGTAAAGCACTTTCGACGGGGACGATGATGACGGTACCCGTAGAA 5367 Query 397 GAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCC 456 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| | Sbjct 5366 GAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTC 5307 Query 457 GGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491 ||||| ||| |||||||||||| ||||||| |||| Sbjct 5306 GGAATGACT-GGGCGTAAAGGGCGCGTAGGCGGTT 5273 >SEQ14764 Length=5928 Score = 293 bits (324), Expect = 7e-77 Identities = 281/364 (77%), Gaps = 27/364 (7%) Strand=Plus/Minus Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222 ||| ||||||||||||||| ||||| ||| |||||||||||||||| ||||| | ||| Sbjct 5098 GTCGGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCTGTAGCGGGTCTG 5039 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||||| Sbjct 5038 AGAGGATGATCCGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAG 4979 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||||||| |||||||| || |||||| |||| | |||||||| | || ||||| Sbjct 4978 TGGGGAATATTGGACAATGGGGGGAACCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGG 4919 Query 343 CCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA------------TAAT---------- 380 |||| ||| ||||||| || | | |||| || |||| Sbjct 4918 CCTTATGGTTGTAAAGCACTTTAAGCGAGGAGGAGGCTCTTTTGGTTAATACCCAAGATG 4859 Query 381 ----GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC 436 |||| |||| | || |||| |||||||||| |||||||||||||||||||||| Sbjct 4858 AGTGGACGTTACTCGCAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATAC 4799 Query 437 GTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTA 496 |||| || ||||||| |||| ||||| |||||||||| ||||||||| || || ||| Sbjct 4798 AGAGGGTGCGAGCGTTAATCGGATTTACT-GGGCGTAAAGCGTGCGTAGGCGGCTTTTTA 4740 Query 497 AGTC 500 |||| Sbjct 4739 AGTC 4736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497223473408