Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5770 378 1e-102 SEQ10664 340 3e-91 SEQ19278 118 2e-24 seq5954 118 2e-24 >seq5770 Length=6364 Score = 378 bits (418), Expect = 1e-102 Identities = 272/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| ||||| || | | |||||||| Sbjct 3701 GAACGAGACCTTAACCTACTAAATAGGACTATTAGCTTTTGCTGATTTGTT-CTTCTTAG 3759 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 3760 AGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 3819 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||||||||| | | |||||||| Sbjct 3820 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAACGAGTAC-TATCCTTGGCC 3878 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3879 GAGAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATT 3938 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 3939 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 3998 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 3999 GCCCTTTGTA 4008 >SEQ10664 Length=18453 Score = 340 bits (376), Expect = 3e-91 Identities = 264/310 (85%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||| ||||||| || || || || ||| ||||||| Sbjct 1320 GAACGAGACCTTAACCCT-TAAATAGAGTTGCTGGCATTTGCTGGTAAAT--CTTCTTAT 1376 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1377 GGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1436 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| |||| | || ||| || Sbjct 1437 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGCTTTTC--CTTAACC 1494 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 1495 GAGAGGTTTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 1554 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 1555 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 1614 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 1615 GCCCTTTGTA 1624 Score = 340 bits (376), Expect = 3e-91 Identities = 264/310 (85%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||| ||||||| || || || || ||| ||||||| Sbjct 9661 GAACGAGACCTTAACCCT-TAAATAGAGTTGCTGGCATTTGCTGGTAAAT--CTTCTTAT 9717 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 9718 GGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 9777 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| |||| | || ||| || Sbjct 9778 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGCTTTTC--CTTAACC 9835 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 9836 GAGAGGTTTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 9895 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 9896 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 9955 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 9956 GCCCTTTGTA 9965 >SEQ19278 Length=35962 Score = 118 bits (130), Expect = 2e-24 Identities = 160/219 (73%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| |||||||||||| || ||||||||||| |||||| |||||||||||||| | Sbjct 2916 TTGAG-CAATAACAGGTCGGT----CCCTTAGATGTCCTGGGCTGCACGCGCGCTACAAT 2970 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG 228 || || ||||| || || ||| | ||| ||||| |||||| | | || | || Sbjct 2971 GAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCACTT 3028 Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 || |||| ||||| | | | || || | || | | | || |||| |||||| || | Sbjct 3029 TCATGCTTGGGATTGTGGACTGAAACTGTT-CACATGAATTTGGAAGTCCTAGTTAGTGT 3087 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 | ||||| | | ||| |||| ||||| |||||||||||| Sbjct 3088 GAGTCATTAACTCGCATTGACTACGTTCCTGCCCTTTGT 3126 >seq5954 Length=10359 Score = 118 bits (130), Expect = 2e-24 Identities = 160/219 (73%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| |||||||||||| || ||||||||||| |||||| |||||||||||||| | Sbjct 8590 TTGAG-CAATAACAGGTCGGT----CCCTTAGATGTCCTGGGCTGCACGCGCGCTACAAT 8644 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG 228 || || ||||| || || ||| | ||| ||||| |||||| | | || | || Sbjct 8645 GAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCACTT 8702 Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 || |||| ||||| | | | || || | || | | | || |||| |||||| || | Sbjct 8703 TCATGCTTGGGATTGTGGACTGAAACTGTT-CACATGAATTTGGAAGTCCTAGTTAGTGT 8761 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 | ||||| | | ||| |||| ||||| |||||||||||| Sbjct 8762 GAGTCATTAACTCGCATTGACTACGTTCCTGCCCTTTGT 8800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946961854976