Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 410 4e-112 SEQ17146 361 2e-97 >SEQ14764 Length=5928 Score = 410 bits (454), Expect = 4e-112 Identities = 385/483 (80%), Gaps = 8/483 (2%) Strand=Plus/Minus Query 1 TCGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||||| || |||||| ||| ||||||| ||||||||||||| |||||||| ||| Sbjct 2554 TCGAGTCTTAATAGGGCGTTTAGTTGCTGGGTATAGACCCGAAACCGGGTGATCTATCCA 2495 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 || |||| ||||||| |||||||| ||||||| ||||||||||| |||||||| Sbjct 2494 TGAGCAGGTTGAAGGTTGGGTAACACTAACTGGAGGACCGAACCCACTGTCGTTGAAAAG 2435 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||||||||| ||||| ||||||||||||||||| |||||| || |||||||||||| Sbjct 2434 CCAGGGGATGACTTGTGGATAGGGGTGAAAGGCTAATCAAACTCGGTGATAGCTGGTTCT 2375 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTA 237 | |||||| |||||||||||| ||||| | | || ||||| ||||||||||||||||| Sbjct 2374 CCCCGAAAGCTATTTAGGTAGCGCCTCGGACGAAT-ACCATAGGGGGTAGAGCACTGTTT 2316 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 |||||||||||||| |||||||||||||| |||||||||||||| | || ||| | Sbjct 2315 CGGCTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAATACCTATGAGTACT 2256 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | | |||||| || ||||||||| |||||| | |||||| || ||||| ||| Sbjct 2255 ATC-CGGGAGACAGACTGCGGGTGCTAACGTCCGTAGTCAAGAGGAAAACAATCCAGACC 2197 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||||||||||||| |||| | || ||||| | ||||| || || || ||||| Sbjct 2196 GCCAGCTAAGGCCCCAAAATTATAGTTAAGTGGGA--AACGATGTGGGAAGGCATAGACA 2139 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 ||||||| |||||||| |||||||||| | |||||||| |||||| |||||||||||| Sbjct 2138 GCTAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTAGTC 2080 Query 478 GAG 480 ||| Sbjct 2079 GAG 2077 >SEQ17146 Length=6450 Score = 361 bits (400), Expect = 2e-97 Identities = 371/479 (77%), Gaps = 7/479 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||||| ||| ||||| | |||||||||||| ||||||||| ||| Sbjct 3054 CGAGTCTGAATAGGGCGACTGAGTTGCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCA 2995 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||| Sbjct 2994 TGGCCAGGCTGAAGGTGCGGTAACACGCACTGGAGGGCCGAACCCACGCCTGTTGAAAAA 2935 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||||||||||| |||||||||||||| || |||||| ||| |||||||||||| Sbjct 2934 GTCGGGGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGTTCT 2875 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGT-ATCACCATCGGGGGTAGAGCACTGTTAT 238 | ||||| ||||| |||||| | || || | ||| | ||||||||||||||| Sbjct 2874 CCGCGAAATCTATTGAGGTAGATCGTCGGGTGTTTACCCTGGGGGGTAGAGCACTGGATG 2815 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTA 298 |||||||||| | | ||||||||||| |||||||||||| | || || | || Sbjct 2814 GGCTAGGGGGGCCCAAAGCCTTACCAAACCTAACCAAACTCCGAATACCCAGGAG-TATA 2756 Query 299 CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTA 358 | ||| || || ||||||||||||||| | ||||||| || | || ||| | Sbjct 2755 GCCCGGCAGACAGACAGTGGGTGCTAAGGTCCATTGTCGAGAGGGAAACAGCCCAGACCA 2696 Query 359 TCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAG 418 ||||||||||||| |||| ||||||| | || || || | | | || ||| Sbjct 2695 CCAGCTAAGGCCCCTAAATCGTGGCTAAGTGGGA--AAGGATGTGGGGATTCCAAAACAA 2638 Query 419 CTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 | |||| |||||||| |||||||||| || |||||||| |||||| |||||||| ||| Sbjct 2637 CCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTGGTC 2580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689175200768