Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value SEQ14764 233 4e-59 SEQ17146 170 4e-40 >SEQ14764 Length=5928 Score = 233 bits (258), Expect = 4e-59 Identities = 249/325 (77%), Gaps = 9/325 (3%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| |||||||||||||||| | | |||||||||| |||||| |||| ||||||| Sbjct 3165 AGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCTGCGATA 3106 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC--- 117 |||| ||||||| ||||| | || ||||||| ||||||| |||||||||||||| Sbjct 3105 AGCTTCGGGGAGGCGGCAAATATCCTGTGATCCGGAGATTTCTGAATGGGGAAACCCACT 3046 Query 118 GGCCCTTTGG--GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACT 175 || | || | || ||||| ||||||||||| |||| | ||||||| || ||| | Sbjct 3045 TACCATAAGGTAGGTATCGCATGATGAATACATAGTCATGCGAGGCGAACGAGGGGAAGT 2986 Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235 ||||||||| |||| | ||||||||||||||| ||||||||| ||||| ||||||| Sbjct 2985 GAAACATCTCAGTACCCTTAGGAAAAGAAATCAATTGAGATTCCCTCAGTAGCGGCGAGC 2926 Query 236 GAAATGGGATGAG-CCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGG 294 ||| ||||| || || ||| | ||| || || ||| |||| |||||| || | Sbjct 2925 GAACGGGGATCAGCCCATTAAGTTATATGTGTAT---TAGCGGAAAGCTCTGGGAAGTGC 2869 Query 295 AGCCATAGCGGGTGATAGCCCCGTA 319 || ||| ||||||||| |||||| Sbjct 2868 TACCGTAGAGGGTGATAGTCCCGTA 2844 >SEQ17146 Length=6450 Score = 170 bits (188), Expect = 4e-40 Identities = 182/236 (77%), Gaps = 16/236 (7%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | | |||||||||||||||| ||| ||||| |||| ||| Sbjct 3646 GGTGGATGCCTTGGCACTAAGAGGCGATGAAGGACGTGGTACGCTGCGAAAAGCCATGGG 3587 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT---- 125 ||| || |||| |||||||||| ||| ||||||||||| ||||| ||| Sbjct 3586 GAGCC-GCGAACAGGCTTTGATCCGTGGATGTCCGAATGGGGCAACCC---CCTCGCAAG 3531 Query 126 -GGGTCATTGCATGCTGAATACATAGGTATGCA--AAGCGAACGCGGCGAACTGAAACAT 182 || |||| | |||||||||||||| ||| | || ||| ||| |||||||||||| Sbjct 3530 AGGATCATG---TACTGAATACATAGGT--GCATGAGGCAAACCCGGGGAACTGAAACAT 3476 Query 183 CTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || |||| ||| ||||||||| |||||| |||||||| |||||||||||||||| Sbjct 3475 CTCAGTACCTGGAGGAAAAGACATCAACAGAGATTCCGCTAGTAGTGGCGAGCGAA 3420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918169095872